Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl35aO55142 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl35aO55142 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC11.72□□□□□ -0.53
Rpl35aO55142 Mir8098-201ENSMUST00000184011 137 ntBASIC11.72□□□□□ -0.53
Rpl35aO55142 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC11.72□□□□□ -0.53
Rpl35aO55142 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl35aO55142 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl35aO55142 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC11.72□□□□□ -0.53
Rpl35aO55142 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl35aO55142 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl35aO55142 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Rpl35aO55142 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Rpl35aO55142 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl35aO55142 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl35aO55142 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Rpl35aO55142 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl35aO55142 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl35aO55142 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl35aO55142 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl35aO55142 Hivep3-201ENSMUST00000084306 2973 ntBASIC11.72□□□□□ -0.53
Rpl35aO55142 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl35aO55142 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl35aO55142 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Rpl35aO55142 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl35aO55142 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl35aO55142 AC115863.1-201ENSMUST00000214815 1813 ntBASIC11.72□□□□□ -0.53
Rpl35aO55142 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl35aO55142 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl35aO55142 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl35aO55142 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rpl35aO55142 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rpl35aO55142 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rpl35aO55142 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rpl35aO55142 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rpl35aO55142 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Rpl35aO55142 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Rpl35aO55142 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Rpl35aO55142 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rpl35aO55142 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
Rpl35aO55142 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rpl35aO55142 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rpl35aO55142 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rpl35aO55142 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
Rpl35aO55142 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rpl35aO55142 Sybu-209ENSMUST00000228639 4113 ntBASIC11.71□□□□□ -0.53
Rpl35aO55142 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Rpl35aO55142 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
Rpl35aO55142 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Rpl35aO55142 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rpl35aO55142 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC11.71□□□□□ -0.53
Rpl35aO55142 AC133598.3-202ENSMUST00000224219 531 ntBASIC11.71□□□□□ -0.53
Rpl35aO55142 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rpl35aO55142 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Rpl35aO55142 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Rpl35aO55142 Gm43598-201ENSMUST00000202482 2479 ntBASIC11.71□□□□□ -0.53
Rpl35aO55142 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rpl35aO55142 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rpl35aO55142 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Rpl35aO55142 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rpl35aO55142 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rpl35aO55142 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rpl35aO55142 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rpl35aO55142 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Rpl35aO55142 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Rpl35aO55142 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC11.7□□□□□ -0.54
Rpl35aO55142 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rpl35aO55142 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Rpl35aO55142 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rpl35aO55142 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rpl35aO55142 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rpl35aO55142 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rpl35aO55142 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rpl35aO55142 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rpl35aO55142 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Rpl35aO55142 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.7□□□□□ -0.54
Rpl35aO55142 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rpl35aO55142 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rpl35aO55142 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC11.7□□□□□ -0.54
Rpl35aO55142 Gm45244-201ENSMUST00000211328 2200 ntBASIC11.7□□□□□ -0.54
Rpl35aO55142 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rpl35aO55142 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rpl35aO55142 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rpl35aO55142 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rpl35aO55142 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rpl35aO55142 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rpl35aO55142 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC11.7□□□□□ -0.54
Rpl35aO55142 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC11.7□□□□□ -0.54
Rpl35aO55142 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC11.7□□□□□ -0.54
Rpl35aO55142 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Rpl35aO55142 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rpl35aO55142 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rpl35aO55142 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rpl35aO55142 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC11.7□□□□□ -0.54
Rpl35aO55142 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rpl35aO55142 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rpl35aO55142 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rpl35aO55142 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Rpl35aO55142 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rpl35aO55142 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rpl35aO55142 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms