Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6dO55057 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6dO55057 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6dO55057 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.45□□□□□ -0.42
Pde6dO55057 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6dO55057 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6dO55057 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6dO55057 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6dO55057 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Pde6dO55057 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6dO55057 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6dO55057 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC12.45□□□□□ -0.42
Pde6dO55057 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6dO55057 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6dO55057 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Pde6dO55057 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6dO55057 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6dO55057 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6dO55057 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC12.45□□□□□ -0.42
Pde6dO55057 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Pde6dO55057 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6dO55057 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6dO55057 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6dO55057 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6dO55057 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
Pde6dO55057 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.45□□□□□ -0.42
Pde6dO55057 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6dO55057 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Pde6dO55057 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6dO55057 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6dO55057 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6dO55057 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Pde6dO55057 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Pde6dO55057 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6dO55057 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6dO55057 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6dO55057 Gm10676-201ENSMUST00000098778 3221 ntBASIC12.44□□□□□ -0.42
Pde6dO55057 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6dO55057 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Pde6dO55057 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6dO55057 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6dO55057 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6dO55057 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC12.44□□□□□ -0.42
Pde6dO55057 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6dO55057 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6dO55057 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.44□□□□□ -0.42
Pde6dO55057 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.44□□□□□ -0.42
Pde6dO55057 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6dO55057 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6dO55057 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6dO55057 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Pde6dO55057 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Pde6dO55057 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6dO55057 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6dO55057 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6dO55057 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Pde6dO55057 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC12.43□□□□□ -0.42
Pde6dO55057 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6dO55057 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6dO55057 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6dO55057 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Pde6dO55057 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC12.43□□□□□ -0.42
Pde6dO55057 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6dO55057 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6dO55057 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6dO55057 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Pde6dO55057 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6dO55057 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6dO55057 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6dO55057 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.43□□□□□ -0.42
Pde6dO55057 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6dO55057 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Pde6dO55057 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6dO55057 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6dO55057 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Pde6dO55057 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC12.43□□□□□ -0.42
Pde6dO55057 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6dO55057 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6dO55057 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6dO55057 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6dO55057 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6dO55057 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Pde6dO55057 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6dO55057 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6dO55057 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Pde6dO55057 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6dO55057 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6dO55057 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6dO55057 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Pde6dO55057 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6dO55057 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6dO55057 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Pde6dO55057 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6dO55057 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Pde6dO55057 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6dO55057 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Pde6dO55057 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.42□□□□□ -0.42
Pde6dO55057 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.42□□□□□ -0.42
Pde6dO55057 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Pde6dO55057 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms