Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarce1O54941 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Smarce1O54941 Mir770-201ENSMUST00000103252 94 ntBASIC18.74■□□□□ 0.59
Smarce1O54941 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC18.74■□□□□ 0.59
Smarce1O54941 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarce1O54941 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarce1O54941 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarce1O54941 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Smarce1O54941 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarce1O54941 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarce1O54941 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarce1O54941 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarce1O54941 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC18.74■□□□□ 0.59
Smarce1O54941 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smarce1O54941 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarce1O54941 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarce1O54941 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarce1O54941 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Smarce1O54941 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarce1O54941 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarce1O54941 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarce1O54941 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.73■□□□□ 0.59
Smarce1O54941 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Smarce1O54941 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Smarce1O54941 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Smarce1O54941 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.73■□□□□ 0.59
Smarce1O54941 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Smarce1O54941 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.73■□□□□ 0.59
Smarce1O54941 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarce1O54941 Gm9987-201ENSMUST00000069768 567 ntBASIC18.73■□□□□ 0.59
Smarce1O54941 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Smarce1O54941 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarce1O54941 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarce1O54941 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarce1O54941 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smarce1O54941 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC18.72■□□□□ 0.59
Smarce1O54941 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarce1O54941 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Smarce1O54941 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarce1O54941 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarce1O54941 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Smarce1O54941 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
Smarce1O54941 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarce1O54941 Gm9013-201ENSMUST00000132939 882 ntBASIC18.72■□□□□ 0.59
Smarce1O54941 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.72■□□□□ 0.59
Smarce1O54941 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Smarce1O54941 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Smarce1O54941 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarce1O54941 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarce1O54941 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarce1O54941 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Smarce1O54941 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarce1O54941 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Smarce1O54941 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Smarce1O54941 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarce1O54941 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarce1O54941 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Smarce1O54941 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarce1O54941 Gm10013-201ENSMUST00000106074 672 ntBASIC18.71■□□□□ 0.59
Smarce1O54941 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC18.71■□□□□ 0.59
Smarce1O54941 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarce1O54941 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Smarce1O54941 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Smarce1O54941 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarce1O54941 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Smarce1O54941 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Smarce1O54941 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Smarce1O54941 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC18.71■□□□□ 0.58
Smarce1O54941 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarce1O54941 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarce1O54941 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarce1O54941 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarce1O54941 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarce1O54941 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarce1O54941 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarce1O54941 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC18.7■□□□□ 0.58
Smarce1O54941 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Smarce1O54941 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Smarce1O54941 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Smarce1O54941 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarce1O54941 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarce1O54941 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
Smarce1O54941 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Smarce1O54941 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarce1O54941 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarce1O54941 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarce1O54941 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC18.7■□□□□ 0.58
Smarce1O54941 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Smarce1O54941 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Smarce1O54941 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarce1O54941 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Smarce1O54941 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Smarce1O54941 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18.69■□□□□ 0.58
Smarce1O54941 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarce1O54941 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarce1O54941 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Smarce1O54941 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Smarce1O54941 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarce1O54941 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Smarce1O54941 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms