Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col15a1O35206 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col15a1O35206 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Col15a1O35206 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col15a1O35206 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC20.06■□□□□ 0.8
Col15a1O35206 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
Col15a1O35206 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC20.06■□□□□ 0.8
Col15a1O35206 Gm7336-201ENSMUST00000107041 1232 ntBASIC20.06■□□□□ 0.8
Col15a1O35206 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col15a1O35206 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col15a1O35206 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC20.06■□□□□ 0.8
Col15a1O35206 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Col15a1O35206 Wdyhv1-206ENSMUST00000227142 786 ntBASIC20.06■□□□□ 0.8
Col15a1O35206 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col15a1O35206 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col15a1O35206 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col15a1O35206 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col15a1O35206 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col15a1O35206 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col15a1O35206 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col15a1O35206 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Col15a1O35206 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col15a1O35206 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col15a1O35206 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col15a1O35206 AC154767.3-201ENSMUST00000225150 1342 ntBASIC20.05■□□□□ 0.8
Col15a1O35206 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col15a1O35206 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col15a1O35206 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Col15a1O35206 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC20.05■□□□□ 0.8
Col15a1O35206 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC20.05■□□□□ 0.8
Col15a1O35206 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC20.05■□□□□ 0.8
Col15a1O35206 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col15a1O35206 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Col15a1O35206 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col15a1O35206 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col15a1O35206 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col15a1O35206 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col15a1O35206 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Col15a1O35206 Gm28265-201ENSMUST00000188201 2319 ntBASIC20.05■□□□□ 0.8
Col15a1O35206 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col15a1O35206 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col15a1O35206 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Col15a1O35206 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col15a1O35206 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col15a1O35206 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Col15a1O35206 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Col15a1O35206 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.04■□□□□ 0.8
Col15a1O35206 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Col15a1O35206 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col15a1O35206 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col15a1O35206 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col15a1O35206 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col15a1O35206 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Col15a1O35206 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col15a1O35206 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col15a1O35206 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col15a1O35206 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC20.03■□□□□ 0.8
Col15a1O35206 Gm25287-201ENSMUST00000103846 110 ntBASIC20.03■□□□□ 0.8
Col15a1O35206 Gm22918-201ENSMUST00000103855 110 ntBASIC20.03■□□□□ 0.8
Col15a1O35206 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col15a1O35206 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC20.03■□□□□ 0.8
Col15a1O35206 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Col15a1O35206 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC20.03■□□□□ 0.8
Col15a1O35206 Gm7774-201ENSMUST00000200064 533 ntBASIC20.03■□□□□ 0.8
Col15a1O35206 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col15a1O35206 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col15a1O35206 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col15a1O35206 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC20.03■□□□□ 0.8
Col15a1O35206 Gm10154-201ENSMUST00000084445 354 ntBASIC20.03■□□□□ 0.8
Col15a1O35206 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col15a1O35206 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Col15a1O35206 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Col15a1O35206 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col15a1O35206 Gm7901-201ENSMUST00000120430 1597 ntBASIC20.03■□□□□ 0.8
Col15a1O35206 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
Col15a1O35206 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col15a1O35206 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col15a1O35206 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
Col15a1O35206 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col15a1O35206 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Col15a1O35206 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC20.02■□□□□ 0.8
Col15a1O35206 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col15a1O35206 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col15a1O35206 Gm10253-201ENSMUST00000194270 940 ntBASIC20.02■□□□□ 0.8
Col15a1O35206 AC126408.1-201ENSMUST00000225184 523 ntBASIC20.02■□□□□ 0.8
Col15a1O35206 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col15a1O35206 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col15a1O35206 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col15a1O35206 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Col15a1O35206 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Col15a1O35206 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Col15a1O35206 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.79
Col15a1O35206 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Col15a1O35206 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Col15a1O35206 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC20.02■□□□□ 0.79
Col15a1O35206 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Col15a1O35206 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Col15a1O35206 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Col15a1O35206 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Col15a1O35206 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms