Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
B020004C17RikJ3QP07 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
B020004C17RikJ3QP07 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
B020004C17RikJ3QP07 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
B020004C17RikJ3QP07 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
B020004C17RikJ3QP07 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
B020004C17RikJ3QP07 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC17.53■□□□□ 0.4
B020004C17RikJ3QP07 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
B020004C17RikJ3QP07 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
B020004C17RikJ3QP07 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
B020004C17RikJ3QP07 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
B020004C17RikJ3QP07 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
B020004C17RikJ3QP07 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
B020004C17RikJ3QP07 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
B020004C17RikJ3QP07 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
B020004C17RikJ3QP07 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
B020004C17RikJ3QP07 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
B020004C17RikJ3QP07 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.52■□□□□ 0.4
B020004C17RikJ3QP07 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
B020004C17RikJ3QP07 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
B020004C17RikJ3QP07 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
B020004C17RikJ3QP07 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.52■□□□□ 0.4
B020004C17RikJ3QP07 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC17.52■□□□□ 0.4
B020004C17RikJ3QP07 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
B020004C17RikJ3QP07 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC17.52■□□□□ 0.4
B020004C17RikJ3QP07 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
B020004C17RikJ3QP07 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC17.52■□□□□ 0.4
B020004C17RikJ3QP07 Gm7774-201ENSMUST00000200064 533 ntBASIC17.52■□□□□ 0.4
B020004C17RikJ3QP07 AC131710.1-201ENSMUST00000228336 990 ntBASIC17.52■□□□□ 0.4
B020004C17RikJ3QP07 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
B020004C17RikJ3QP07 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.52■□□□□ 0.4
B020004C17RikJ3QP07 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
B020004C17RikJ3QP07 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
B020004C17RikJ3QP07 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
B020004C17RikJ3QP07 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
B020004C17RikJ3QP07 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
B020004C17RikJ3QP07 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
B020004C17RikJ3QP07 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
B020004C17RikJ3QP07 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
B020004C17RikJ3QP07 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
B020004C17RikJ3QP07 Prkcz2-201ENSMUST00000206136 1756 ntBASIC17.51■□□□□ 0.39
B020004C17RikJ3QP07 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
B020004C17RikJ3QP07 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
B020004C17RikJ3QP07 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
B020004C17RikJ3QP07 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
B020004C17RikJ3QP07 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.51■□□□□ 0.39
B020004C17RikJ3QP07 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
B020004C17RikJ3QP07 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
B020004C17RikJ3QP07 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
B020004C17RikJ3QP07 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
B020004C17RikJ3QP07 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
B020004C17RikJ3QP07 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
B020004C17RikJ3QP07 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
B020004C17RikJ3QP07 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
B020004C17RikJ3QP07 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
B020004C17RikJ3QP07 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
B020004C17RikJ3QP07 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
B020004C17RikJ3QP07 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
B020004C17RikJ3QP07 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
B020004C17RikJ3QP07 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
B020004C17RikJ3QP07 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
B020004C17RikJ3QP07 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
B020004C17RikJ3QP07 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
B020004C17RikJ3QP07 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
B020004C17RikJ3QP07 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.5■□□□□ 0.39
B020004C17RikJ3QP07 Gm7336-201ENSMUST00000107041 1232 ntBASIC17.5■□□□□ 0.39
B020004C17RikJ3QP07 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
B020004C17RikJ3QP07 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC17.5■□□□□ 0.39
B020004C17RikJ3QP07 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC17.5■□□□□ 0.39
B020004C17RikJ3QP07 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17.5■□□□□ 0.39
B020004C17RikJ3QP07 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC17.5■□□□□ 0.39
B020004C17RikJ3QP07 CT030684.1-201ENSMUST00000227292 914 ntBASIC17.5■□□□□ 0.39
B020004C17RikJ3QP07 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
B020004C17RikJ3QP07 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
B020004C17RikJ3QP07 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC17.5■□□□□ 0.39
B020004C17RikJ3QP07 Gm10154-201ENSMUST00000084445 354 ntBASIC17.5■□□□□ 0.39
B020004C17RikJ3QP07 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
B020004C17RikJ3QP07 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.5■□□□□ 0.39
B020004C17RikJ3QP07 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.5■□□□□ 0.39
B020004C17RikJ3QP07 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
B020004C17RikJ3QP07 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
B020004C17RikJ3QP07 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
B020004C17RikJ3QP07 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
B020004C17RikJ3QP07 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
B020004C17RikJ3QP07 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
B020004C17RikJ3QP07 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
B020004C17RikJ3QP07 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.5■□□□□ 0.39
B020004C17RikJ3QP07 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
B020004C17RikJ3QP07 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
B020004C17RikJ3QP07 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
B020004C17RikJ3QP07 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
B020004C17RikJ3QP07 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
B020004C17RikJ3QP07 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
B020004C17RikJ3QP07 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
B020004C17RikJ3QP07 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
B020004C17RikJ3QP07 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
B020004C17RikJ3QP07 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.49■□□□□ 0.39
B020004C17RikJ3QP07 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
B020004C17RikJ3QP07 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
B020004C17RikJ3QP07 Gm24158-201ENSMUST00000175263 71 ntBASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms