Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Gm23935-201ENSMUST00000102303 57 ntBASIC19.21■□□□□ 0.67
Trim34bJ3QNR8 Gm24270-201ENSMUST00000102326 57 ntBASIC19.21■□□□□ 0.67
Trim34bJ3QNR8 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
Trim34bJ3QNR8 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim34bJ3QNR8 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim34bJ3QNR8 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trim34bJ3QNR8 Gm24245-201ENSMUST00000157318 57 ntBASIC19.21■□□□□ 0.67
Trim34bJ3QNR8 Grk6-207ENSMUST00000225925 2769 ntBASIC19.21■□□□□ 0.67
Trim34bJ3QNR8 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim34bJ3QNR8 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim34bJ3QNR8 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim34bJ3QNR8 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim34bJ3QNR8 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim34bJ3QNR8 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim34bJ3QNR8 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Trim34bJ3QNR8 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim34bJ3QNR8 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Trim34bJ3QNR8 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim34bJ3QNR8 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Trim34bJ3QNR8 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim34bJ3QNR8 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim34bJ3QNR8 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim34bJ3QNR8 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC19.2■□□□□ 0.66
Trim34bJ3QNR8 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC19.2■□□□□ 0.66
Trim34bJ3QNR8 Gm44945-201ENSMUST00000206764 1187 ntBASIC19.2■□□□□ 0.66
Trim34bJ3QNR8 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim34bJ3QNR8 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim34bJ3QNR8 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim34bJ3QNR8 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim34bJ3QNR8 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim34bJ3QNR8 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim34bJ3QNR8 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim34bJ3QNR8 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim34bJ3QNR8 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim34bJ3QNR8 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim34bJ3QNR8 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim34bJ3QNR8 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim34bJ3QNR8 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim34bJ3QNR8 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim34bJ3QNR8 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim34bJ3QNR8 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim34bJ3QNR8 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim34bJ3QNR8 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Trim34bJ3QNR8 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim34bJ3QNR8 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim34bJ3QNR8 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim34bJ3QNR8 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC19.19■□□□□ 0.66
Trim34bJ3QNR8 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim34bJ3QNR8 Gm4913-201ENSMUST00000117075 1290 ntBASIC19.19■□□□□ 0.66
Trim34bJ3QNR8 Gm25925-201ENSMUST00000158314 306 ntBASIC19.19■□□□□ 0.66
Trim34bJ3QNR8 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC19.19■□□□□ 0.66
Trim34bJ3QNR8 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim34bJ3QNR8 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim34bJ3QNR8 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim34bJ3QNR8 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Trim34bJ3QNR8 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim34bJ3QNR8 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim34bJ3QNR8 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim34bJ3QNR8 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim34bJ3QNR8 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Trim34bJ3QNR8 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC19.19■□□□□ 0.66
Trim34bJ3QNR8 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim34bJ3QNR8 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim34bJ3QNR8 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC19.18■□□□□ 0.66
Trim34bJ3QNR8 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim34bJ3QNR8 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim34bJ3QNR8 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim34bJ3QNR8 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Trim34bJ3QNR8 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC19.18■□□□□ 0.66
Trim34bJ3QNR8 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim34bJ3QNR8 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim34bJ3QNR8 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC19.18■□□□□ 0.66
Trim34bJ3QNR8 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim34bJ3QNR8 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim34bJ3QNR8 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Trim34bJ3QNR8 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim34bJ3QNR8 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim34bJ3QNR8 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim34bJ3QNR8 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim34bJ3QNR8 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim34bJ3QNR8 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Trim34bJ3QNR8 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Trim34bJ3QNR8 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim34bJ3QNR8 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim34bJ3QNR8 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim34bJ3QNR8 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim34bJ3QNR8 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
Trim34bJ3QNR8 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Trim34bJ3QNR8 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim34bJ3QNR8 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim34bJ3QNR8 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim34bJ3QNR8 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim34bJ3QNR8 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Trim34bJ3QNR8 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim34bJ3QNR8 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim34bJ3QNR8 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC19.17■□□□□ 0.66
Trim34bJ3QNR8 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim34bJ3QNR8 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim34bJ3QNR8 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim34bJ3QNR8 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms