Protein–RNA interactions for Protein: J3QMK1

Sgo2b, Shugoshin 2B, mousemouse

Predictions only

Length 1,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgo2bJ3QMK1 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sgo2bJ3QMK1 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Sgo2bJ3QMK1 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Sgo2bJ3QMK1 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sgo2bJ3QMK1 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sgo2bJ3QMK1 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sgo2bJ3QMK1 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Sgo2bJ3QMK1 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sgo2bJ3QMK1 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.72■□□□□ 0.11
Sgo2bJ3QMK1 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Sgo2bJ3QMK1 Mir3081-201ENSMUST00000175305 84 ntBASIC15.72■□□□□ 0.11
Sgo2bJ3QMK1 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sgo2bJ3QMK1 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Sgo2bJ3QMK1 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.72■□□□□ 0.11
Sgo2bJ3QMK1 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sgo2bJ3QMK1 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.72■□□□□ 0.11
Sgo2bJ3QMK1 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sgo2bJ3QMK1 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sgo2bJ3QMK1 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sgo2bJ3QMK1 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Sgo2bJ3QMK1 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sgo2bJ3QMK1 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sgo2bJ3QMK1 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sgo2bJ3QMK1 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sgo2bJ3QMK1 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sgo2bJ3QMK1 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sgo2bJ3QMK1 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sgo2bJ3QMK1 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.72■□□□□ 0.11
Sgo2bJ3QMK1 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Sgo2bJ3QMK1 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sgo2bJ3QMK1 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sgo2bJ3QMK1 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sgo2bJ3QMK1 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Sgo2bJ3QMK1 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sgo2bJ3QMK1 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sgo2bJ3QMK1 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Sgo2bJ3QMK1 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sgo2bJ3QMK1 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sgo2bJ3QMK1 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sgo2bJ3QMK1 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sgo2bJ3QMK1 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Sgo2bJ3QMK1 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Sgo2bJ3QMK1 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Sgo2bJ3QMK1 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sgo2bJ3QMK1 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sgo2bJ3QMK1 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sgo2bJ3QMK1 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Sgo2bJ3QMK1 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Sgo2bJ3QMK1 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Sgo2bJ3QMK1 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sgo2bJ3QMK1 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sgo2bJ3QMK1 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sgo2bJ3QMK1 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sgo2bJ3QMK1 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Sgo2bJ3QMK1 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sgo2bJ3QMK1 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sgo2bJ3QMK1 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sgo2bJ3QMK1 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.7■□□□□ 0.1
Sgo2bJ3QMK1 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sgo2bJ3QMK1 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sgo2bJ3QMK1 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.7■□□□□ 0.1
Sgo2bJ3QMK1 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Sgo2bJ3QMK1 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sgo2bJ3QMK1 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sgo2bJ3QMK1 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.7■□□□□ 0.1
Sgo2bJ3QMK1 Gm25406-201ENSMUST00000157599 105 ntBASIC15.7■□□□□ 0.1
Sgo2bJ3QMK1 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Sgo2bJ3QMK1 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sgo2bJ3QMK1 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.7■□□□□ 0.1
Sgo2bJ3QMK1 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.7■□□□□ 0.1
Sgo2bJ3QMK1 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sgo2bJ3QMK1 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.7■□□□□ 0.1
Sgo2bJ3QMK1 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Sgo2bJ3QMK1 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sgo2bJ3QMK1 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sgo2bJ3QMK1 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sgo2bJ3QMK1 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sgo2bJ3QMK1 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sgo2bJ3QMK1 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Sgo2bJ3QMK1 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC15.7■□□□□ 0.1
Sgo2bJ3QMK1 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sgo2bJ3QMK1 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Sgo2bJ3QMK1 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sgo2bJ3QMK1 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Sgo2bJ3QMK1 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Sgo2bJ3QMK1 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Sgo2bJ3QMK1 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sgo2bJ3QMK1 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sgo2bJ3QMK1 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sgo2bJ3QMK1 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sgo2bJ3QMK1 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sgo2bJ3QMK1 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.69■□□□□ 0.1
Sgo2bJ3QMK1 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sgo2bJ3QMK1 Gm14859-201ENSMUST00000117752 357 ntBASIC15.69■□□□□ 0.1
Sgo2bJ3QMK1 Gm27704-201ENSMUST00000185094 107 ntBASIC15.69■□□□□ 0.1
Sgo2bJ3QMK1 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sgo2bJ3QMK1 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sgo2bJ3QMK1 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sgo2bJ3QMK1 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Sgo2bJ3QMK1 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms