Protein–RNA interactions for Protein: E9Q784

Zc3h13, Zinc finger CCCH domain-containing protein 13, mousemouse

Known RBP Predictions only

Length 1,729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h13E9Q784 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Zc3h13E9Q784 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Zc3h13E9Q784 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Zc3h13E9Q784 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Zc3h13E9Q784 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC21.46■■□□□ 1.03
Zc3h13E9Q784 Gm25144-201ENSMUST00000179561 110 ntBASIC21.46■■□□□ 1.03
Zc3h13E9Q784 Gm25352-201ENSMUST00000179815 110 ntBASIC21.46■■□□□ 1.03
Zc3h13E9Q784 AC124732.1-201ENSMUST00000221551 910 ntBASIC21.46■■□□□ 1.03
Zc3h13E9Q784 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC21.46■■□□□ 1.03
Zc3h13E9Q784 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Zc3h13E9Q784 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Zc3h13E9Q784 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Zc3h13E9Q784 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Zc3h13E9Q784 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Zc3h13E9Q784 Gm13015-201ENSMUST00000118674 204 ntBASIC21.46■■□□□ 1.03
Zc3h13E9Q784 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC21.46■■□□□ 1.03
Zc3h13E9Q784 Gm18737-201ENSMUST00000173594 937 ntBASIC21.46■■□□□ 1.03
Zc3h13E9Q784 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC21.46■■□□□ 1.03
Zc3h13E9Q784 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Zc3h13E9Q784 Gm5898-201ENSMUST00000121016 2071 ntBASIC21.45■■□□□ 1.03
Zc3h13E9Q784 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Zc3h13E9Q784 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Zc3h13E9Q784 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Zc3h13E9Q784 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Zc3h13E9Q784 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Zc3h13E9Q784 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Zc3h13E9Q784 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC21.45■■□□□ 1.02
Zc3h13E9Q784 Gm28630-201ENSMUST00000187806 498 ntBASIC21.45■■□□□ 1.02
Zc3h13E9Q784 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Zc3h13E9Q784 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC21.45■■□□□ 1.02
Zc3h13E9Q784 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC21.45■■□□□ 1.02
Zc3h13E9Q784 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Zc3h13E9Q784 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC21.45■■□□□ 1.02
Zc3h13E9Q784 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Zc3h13E9Q784 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Zc3h13E9Q784 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Zc3h13E9Q784 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Zc3h13E9Q784 Gm43294-201ENSMUST00000202850 2490 ntBASIC21.44■■□□□ 1.02
Zc3h13E9Q784 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Zc3h13E9Q784 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Zc3h13E9Q784 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Zc3h13E9Q784 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Zc3h13E9Q784 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Zc3h13E9Q784 Gm24694-201ENSMUST00000180054 110 ntBASIC21.44■■□□□ 1.02
Zc3h13E9Q784 Gm27663-201ENSMUST00000184839 110 ntBASIC21.44■■□□□ 1.02
Zc3h13E9Q784 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Zc3h13E9Q784 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Zc3h13E9Q784 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Zc3h13E9Q784 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Zc3h13E9Q784 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Zc3h13E9Q784 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Zc3h13E9Q784 Gm13337-201ENSMUST00000119183 1594 ntBASIC21.44■■□□□ 1.02
Zc3h13E9Q784 Gm7901-201ENSMUST00000120430 1597 ntBASIC21.44■■□□□ 1.02
Zc3h13E9Q784 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Zc3h13E9Q784 Gm45774-201ENSMUST00000211992 2665 ntBASIC21.44■■□□□ 1.02
Zc3h13E9Q784 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Zc3h13E9Q784 Gm45059-201ENSMUST00000205558 1077 ntBASIC21.43■■□□□ 1.02
Zc3h13E9Q784 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Zc3h13E9Q784 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Zc3h13E9Q784 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Zc3h13E9Q784 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Zc3h13E9Q784 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Zc3h13E9Q784 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.43■■□□□ 1.02
Zc3h13E9Q784 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Zc3h13E9Q784 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Zc3h13E9Q784 Gm45293-201ENSMUST00000209754 1812 ntBASIC21.43■■□□□ 1.02
Zc3h13E9Q784 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC21.43■■□□□ 1.02
Zc3h13E9Q784 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Zc3h13E9Q784 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC21.43■■□□□ 1.02
Zc3h13E9Q784 Gm7775-201ENSMUST00000218871 853 ntBASIC21.43■■□□□ 1.02
Zc3h13E9Q784 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Zc3h13E9Q784 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Zc3h13E9Q784 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Zc3h13E9Q784 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Zc3h13E9Q784 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC21.43■■□□□ 1.02
Zc3h13E9Q784 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC21.43■■□□□ 1.02
Zc3h13E9Q784 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Zc3h13E9Q784 Gm5357-201ENSMUST00000212720 1924 ntBASIC21.42■■□□□ 1.02
Zc3h13E9Q784 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC21.42■■□□□ 1.02
Zc3h13E9Q784 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Zc3h13E9Q784 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Zc3h13E9Q784 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Zc3h13E9Q784 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC21.42■■□□□ 1.02
Zc3h13E9Q784 Gm18062-201ENSMUST00000208020 547 ntBASIC21.42■■□□□ 1.02
Zc3h13E9Q784 Gm18055-201ENSMUST00000208254 547 ntBASIC21.42■■□□□ 1.02
Zc3h13E9Q784 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Zc3h13E9Q784 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Zc3h13E9Q784 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Zc3h13E9Q784 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Zc3h13E9Q784 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
Zc3h13E9Q784 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Zc3h13E9Q784 Gm15163-201ENSMUST00000120749 1302 ntBASIC21.42■■□□□ 1.02
Zc3h13E9Q784 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Zc3h13E9Q784 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Zc3h13E9Q784 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Zc3h13E9Q784 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Zc3h13E9Q784 AL593843.1-201ENSMUST00000195891 145 ntBASIC21.41■■□□□ 1.02
Zc3h13E9Q784 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Zc3h13E9Q784 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Zc3h13E9Q784 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms