Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ube4aE9Q735 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ube4aE9Q735 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Ube4aE9Q735 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Ube4aE9Q735 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ube4aE9Q735 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ube4aE9Q735 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ube4aE9Q735 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Ube4aE9Q735 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ube4aE9Q735 AC157650.3-201ENSMUST00000225058 1476 ntBASIC18.84■□□□□ 0.61
Ube4aE9Q735 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Ube4aE9Q735 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ube4aE9Q735 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ube4aE9Q735 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Ube4aE9Q735 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ube4aE9Q735 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ube4aE9Q735 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ube4aE9Q735 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ube4aE9Q735 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ube4aE9Q735 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ube4aE9Q735 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Ube4aE9Q735 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Ube4aE9Q735 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ube4aE9Q735 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ube4aE9Q735 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ube4aE9Q735 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Ube4aE9Q735 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ube4aE9Q735 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ube4aE9Q735 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ube4aE9Q735 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ube4aE9Q735 Gm13337-201ENSMUST00000119183 1594 ntBASIC18.84■□□□□ 0.61
Ube4aE9Q735 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ube4aE9Q735 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Ube4aE9Q735 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Ube4aE9Q735 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Ube4aE9Q735 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ube4aE9Q735 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ube4aE9Q735 Gm15427-201ENSMUST00000117288 531 ntBASIC18.83■□□□□ 0.6
Ube4aE9Q735 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC18.83■□□□□ 0.6
Ube4aE9Q735 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC18.83■□□□□ 0.6
Ube4aE9Q735 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ube4aE9Q735 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ube4aE9Q735 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ube4aE9Q735 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC18.83■□□□□ 0.6
Ube4aE9Q735 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC18.83■□□□□ 0.6
Ube4aE9Q735 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ube4aE9Q735 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ube4aE9Q735 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ube4aE9Q735 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ube4aE9Q735 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ube4aE9Q735 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ube4aE9Q735 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ube4aE9Q735 Gm29361-201ENSMUST00000183323 2000 ntBASIC18.83■□□□□ 0.6
Ube4aE9Q735 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ube4aE9Q735 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ube4aE9Q735 Gm43072-201ENSMUST00000200283 1671 ntBASIC18.82■□□□□ 0.6
Ube4aE9Q735 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Ube4aE9Q735 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ube4aE9Q735 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ube4aE9Q735 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ube4aE9Q735 Gm11025-201ENSMUST00000140773 466 ntBASIC18.82■□□□□ 0.6
Ube4aE9Q735 Gm27494-201ENSMUST00000184735 189 ntBASIC18.82■□□□□ 0.6
Ube4aE9Q735 Gm45612-201ENSMUST00000211320 160 ntBASIC18.82■□□□□ 0.6
Ube4aE9Q735 AC160980.1-201ENSMUST00000224136 970 ntBASIC18.82■□□□□ 0.6
Ube4aE9Q735 AC154621.1-201ENSMUST00000226155 1119 ntBASIC18.82■□□□□ 0.6
Ube4aE9Q735 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ube4aE9Q735 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ube4aE9Q735 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ube4aE9Q735 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC18.82■□□□□ 0.6
Ube4aE9Q735 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ube4aE9Q735 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ube4aE9Q735 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
Ube4aE9Q735 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ube4aE9Q735 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ube4aE9Q735 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ube4aE9Q735 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ube4aE9Q735 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ube4aE9Q735 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ube4aE9Q735 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ube4aE9Q735 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ube4aE9Q735 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18.81■□□□□ 0.6
Ube4aE9Q735 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ube4aE9Q735 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ube4aE9Q735 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Ube4aE9Q735 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ube4aE9Q735 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Ube4aE9Q735 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ube4aE9Q735 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ube4aE9Q735 Mir1895-201ENSMUST00000122615 79 ntBASIC18.81■□□□□ 0.6
Ube4aE9Q735 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC18.81■□□□□ 0.6
Ube4aE9Q735 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Ube4aE9Q735 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Ube4aE9Q735 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ube4aE9Q735 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ube4aE9Q735 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ube4aE9Q735 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ube4aE9Q735 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ube4aE9Q735 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ube4aE9Q735 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ube4aE9Q735 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 99.5 ms