Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Ccdc112A0AUP1 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc112A0AUP1 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Ccdc112A0AUP1 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc112A0AUP1 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc112A0AUP1 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Ccdc112A0AUP1 AC154412.1-201ENSMUST00000226540 2786 ntBASIC18.01■□□□□ 0.47
Ccdc112A0AUP1 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc112A0AUP1 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc112A0AUP1 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc112A0AUP1 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc112A0AUP1 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc112A0AUP1 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ccdc112A0AUP1 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc112A0AUP1 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc112A0AUP1 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Ccdc112A0AUP1 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc112A0AUP1 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc112A0AUP1 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc112A0AUP1 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC18■□□□□ 0.47
Ccdc112A0AUP1 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ccdc112A0AUP1 Gm6623-201ENSMUST00000173570 544 ntBASIC18■□□□□ 0.47
Ccdc112A0AUP1 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ccdc112A0AUP1 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc112A0AUP1 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc112A0AUP1 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc112A0AUP1 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc112A0AUP1 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Ccdc112A0AUP1 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc112A0AUP1 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc112A0AUP1 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC18■□□□□ 0.47
Ccdc112A0AUP1 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ccdc112A0AUP1 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc112A0AUP1 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc112A0AUP1 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc112A0AUP1 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc112A0AUP1 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Ccdc112A0AUP1 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.99■□□□□ 0.47
Ccdc112A0AUP1 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc112A0AUP1 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc112A0AUP1 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc112A0AUP1 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc112A0AUP1 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC17.99■□□□□ 0.47
Ccdc112A0AUP1 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.99■□□□□ 0.47
Ccdc112A0AUP1 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.99■□□□□ 0.47
Ccdc112A0AUP1 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.99■□□□□ 0.47
Ccdc112A0AUP1 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.99■□□□□ 0.47
Ccdc112A0AUP1 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Ccdc112A0AUP1 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Ccdc112A0AUP1 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc112A0AUP1 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc112A0AUP1 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.99■□□□□ 0.47
Ccdc112A0AUP1 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc112A0AUP1 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc112A0AUP1 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc112A0AUP1 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc112A0AUP1 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc112A0AUP1 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc112A0AUP1 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc112A0AUP1 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc112A0AUP1 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc112A0AUP1 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.98■□□□□ 0.47
Ccdc112A0AUP1 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Ccdc112A0AUP1 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc112A0AUP1 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc112A0AUP1 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC17.98■□□□□ 0.47
Ccdc112A0AUP1 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc112A0AUP1 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc112A0AUP1 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc112A0AUP1 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc112A0AUP1 BC037039-201ENSMUST00000192003 2205 ntBASIC17.98■□□□□ 0.47
Ccdc112A0AUP1 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.98■□□□□ 0.47
Ccdc112A0AUP1 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc112A0AUP1 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc112A0AUP1 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc112A0AUP1 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Ccdc112A0AUP1 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc112A0AUP1 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc112A0AUP1 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc112A0AUP1 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Ccdc112A0AUP1 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc112A0AUP1 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
Ccdc112A0AUP1 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC17.97■□□□□ 0.47
Ccdc112A0AUP1 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc112A0AUP1 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc112A0AUP1 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc112A0AUP1 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc112A0AUP1 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc112A0AUP1 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc112A0AUP1 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc112A0AUP1 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Ccdc112A0AUP1 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc112A0AUP1 Gm5587-201ENSMUST00000206270 674 ntBASIC17.97■□□□□ 0.47
Ccdc112A0AUP1 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc112A0AUP1 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc112A0AUP1 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc112A0AUP1 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Ccdc112A0AUP1 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccdc112A0AUP1 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Ccdc112A0AUP1 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms