Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.81■□□□□ 0.6
Cfap99A0A140LIX9 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cfap99A0A140LIX9 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cfap99A0A140LIX9 Gm12260-201ENSMUST00000122447 411 ntBASIC18.81■□□□□ 0.6
Cfap99A0A140LIX9 Gm12497-201ENSMUST00000138778 237 ntBASIC18.81■□□□□ 0.6
Cfap99A0A140LIX9 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.81■□□□□ 0.6
Cfap99A0A140LIX9 Gm36967-201ENSMUST00000193814 266 ntBASIC18.81■□□□□ 0.6
Cfap99A0A140LIX9 Gm42670-201ENSMUST00000201816 1292 ntBASIC18.81■□□□□ 0.6
Cfap99A0A140LIX9 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cfap99A0A140LIX9 CT943659.1-201ENSMUST00000215459 326 ntBASIC18.81■□□□□ 0.6
Cfap99A0A140LIX9 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cfap99A0A140LIX9 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cfap99A0A140LIX9 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cfap99A0A140LIX9 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cfap99A0A140LIX9 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Cfap99A0A140LIX9 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.81■□□□□ 0.6
Cfap99A0A140LIX9 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Cfap99A0A140LIX9 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cfap99A0A140LIX9 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cfap99A0A140LIX9 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cfap99A0A140LIX9 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cfap99A0A140LIX9 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cfap99A0A140LIX9 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Cfap99A0A140LIX9 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cfap99A0A140LIX9 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Cfap99A0A140LIX9 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cfap99A0A140LIX9 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cfap99A0A140LIX9 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Cfap99A0A140LIX9 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC18.8■□□□□ 0.6
Cfap99A0A140LIX9 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cfap99A0A140LIX9 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cfap99A0A140LIX9 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC18.8■□□□□ 0.6
Cfap99A0A140LIX9 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC18.8■□□□□ 0.6
Cfap99A0A140LIX9 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC18.8■□□□□ 0.6
Cfap99A0A140LIX9 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC18.8■□□□□ 0.6
Cfap99A0A140LIX9 Gm2756-201ENSMUST00000195851 400 ntBASIC18.8■□□□□ 0.6
Cfap99A0A140LIX9 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cfap99A0A140LIX9 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cfap99A0A140LIX9 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Cfap99A0A140LIX9 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cfap99A0A140LIX9 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cfap99A0A140LIX9 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cfap99A0A140LIX9 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cfap99A0A140LIX9 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cfap99A0A140LIX9 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cfap99A0A140LIX9 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cfap99A0A140LIX9 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cfap99A0A140LIX9 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cfap99A0A140LIX9 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Cfap99A0A140LIX9 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cfap99A0A140LIX9 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cfap99A0A140LIX9 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Cfap99A0A140LIX9 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cfap99A0A140LIX9 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Cfap99A0A140LIX9 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cfap99A0A140LIX9 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC18.79■□□□□ 0.6
Cfap99A0A140LIX9 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cfap99A0A140LIX9 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cfap99A0A140LIX9 Dancr-204ENSMUST00000132389 2347 ntBASIC18.79■□□□□ 0.6
Cfap99A0A140LIX9 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cfap99A0A140LIX9 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.79■□□□□ 0.6
Cfap99A0A140LIX9 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC18.79■□□□□ 0.6
Cfap99A0A140LIX9 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cfap99A0A140LIX9 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Cfap99A0A140LIX9 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Cfap99A0A140LIX9 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC18.79■□□□□ 0.6
Cfap99A0A140LIX9 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Cfap99A0A140LIX9 Gm6550-201ENSMUST00000187574 993 ntBASIC18.79■□□□□ 0.6
Cfap99A0A140LIX9 Gm6089-201ENSMUST00000197666 938 ntBASIC18.79■□□□□ 0.6
Cfap99A0A140LIX9 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cfap99A0A140LIX9 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC18.79■□□□□ 0.6
Cfap99A0A140LIX9 AC154222.1-201ENSMUST00000223882 475 ntBASIC18.79■□□□□ 0.6
Cfap99A0A140LIX9 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC18.79■□□□□ 0.6
Cfap99A0A140LIX9 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cfap99A0A140LIX9 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cfap99A0A140LIX9 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC18.79■□□□□ 0.6
Cfap99A0A140LIX9 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cfap99A0A140LIX9 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cfap99A0A140LIX9 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cfap99A0A140LIX9 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cfap99A0A140LIX9 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cfap99A0A140LIX9 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC18.79■□□□□ 0.6
Cfap99A0A140LIX9 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC18.78■□□□□ 0.6
Cfap99A0A140LIX9 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Cfap99A0A140LIX9 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cfap99A0A140LIX9 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cfap99A0A140LIX9 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cfap99A0A140LIX9 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC18.78■□□□□ 0.6
Cfap99A0A140LIX9 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cfap99A0A140LIX9 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cfap99A0A140LIX9 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cfap99A0A140LIX9 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cfap99A0A140LIX9 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cfap99A0A140LIX9 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cfap99A0A140LIX9 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cfap99A0A140LIX9 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Cfap99A0A140LIX9 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cfap99A0A140LIX9 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cfap99A0A140LIX9 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Cfap99A0A140LIX9 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms