Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC10.88□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC10.88□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Gm15442-201ENSMUST00000117905 1527 ntBASIC10.88□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC10.87□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Gm22240-201ENSMUST00000175225 82 ntBASIC10.87□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC10.87□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Gm30025-201ENSMUST00000218555 728 ntBASIC10.87□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13d-4A0A0G2JFX3 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13d-4A0A0G2JFX3 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC10.87□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC10.87□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC10.87□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC10.86□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC10.86□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13d-4A0A0G2JFX3 AC154412.1-201ENSMUST00000226540 2786 ntBASIC10.86□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC10.86□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Gm13474-201ENSMUST00000122466 815 ntBASIC10.86□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC10.86□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13d-4A0A0G2JFX3 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Trav13d-4A0A0G2JFX3 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13d-4A0A0G2JFX3 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav13d-4A0A0G2JFX3 Gm16061-201ENSMUST00000122167 857 ntBASIC10.85□□□□□ -0.67
Trav13d-4A0A0G2JFX3 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms