Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trbv19A0A0B4J1H4 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC12.66□□□□□ -0.38
Trbv19A0A0B4J1H4 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Trbv19A0A0B4J1H4 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv19A0A0B4J1H4 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv19A0A0B4J1H4 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv19A0A0B4J1H4 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv19A0A0B4J1H4 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv19A0A0B4J1H4 Gm6345-202ENSMUST00000180900 204 ntBASIC12.66□□□□□ -0.38
Trbv19A0A0B4J1H4 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trbv19A0A0B4J1H4 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trbv19A0A0B4J1H4 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv19A0A0B4J1H4 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv19A0A0B4J1H4 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv19A0A0B4J1H4 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv19A0A0B4J1H4 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv19A0A0B4J1H4 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv19A0A0B4J1H4 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv19A0A0B4J1H4 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trbv19A0A0B4J1H4 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv19A0A0B4J1H4 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv19A0A0B4J1H4 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv19A0A0B4J1H4 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv19A0A0B4J1H4 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.66□□□□□ -0.38
Trbv19A0A0B4J1H4 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trbv19A0A0B4J1H4 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.65□□□□□ -0.38
Trbv19A0A0B4J1H4 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv19A0A0B4J1H4 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv19A0A0B4J1H4 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv19A0A0B4J1H4 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Trbv19A0A0B4J1H4 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv19A0A0B4J1H4 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.65□□□□□ -0.38
Trbv19A0A0B4J1H4 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv19A0A0B4J1H4 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv19A0A0B4J1H4 Gm11950-201ENSMUST00000121615 838 ntBASIC12.65□□□□□ -0.38
Trbv19A0A0B4J1H4 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv19A0A0B4J1H4 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv19A0A0B4J1H4 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv19A0A0B4J1H4 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv19A0A0B4J1H4 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv19A0A0B4J1H4 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv19A0A0B4J1H4 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv19A0A0B4J1H4 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv19A0A0B4J1H4 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Trbv19A0A0B4J1H4 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv19A0A0B4J1H4 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trbv19A0A0B4J1H4 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trbv19A0A0B4J1H4 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trbv19A0A0B4J1H4 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Trbv19A0A0B4J1H4 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trbv19A0A0B4J1H4 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Trbv19A0A0B4J1H4 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Trbv19A0A0B4J1H4 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv19A0A0B4J1H4 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv19A0A0B4J1H4 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv19A0A0B4J1H4 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv19A0A0B4J1H4 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trbv19A0A0B4J1H4 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv19A0A0B4J1H4 Gm8258-201ENSMUST00000055593 1449 ntBASIC12.64□□□□□ -0.39
Trbv19A0A0B4J1H4 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv19A0A0B4J1H4 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv19A0A0B4J1H4 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv19A0A0B4J1H4 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv19A0A0B4J1H4 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv19A0A0B4J1H4 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv19A0A0B4J1H4 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv19A0A0B4J1H4 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.64□□□□□ -0.39
Trbv19A0A0B4J1H4 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC12.64□□□□□ -0.39
Trbv19A0A0B4J1H4 Gm6257-201ENSMUST00000163864 910 ntBASIC12.64□□□□□ -0.39
Trbv19A0A0B4J1H4 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC12.64□□□□□ -0.39
Trbv19A0A0B4J1H4 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Trbv19A0A0B4J1H4 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv19A0A0B4J1H4 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv19A0A0B4J1H4 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv19A0A0B4J1H4 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv19A0A0B4J1H4 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv19A0A0B4J1H4 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trbv19A0A0B4J1H4 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv19A0A0B4J1H4 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Trbv19A0A0B4J1H4 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv19A0A0B4J1H4 Sybu-209ENSMUST00000228639 4113 ntBASIC12.64□□□□□ -0.39
Trbv19A0A0B4J1H4 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trbv19A0A0B4J1H4 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trbv19A0A0B4J1H4 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv19A0A0B4J1H4 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv19A0A0B4J1H4 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv19A0A0B4J1H4 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv19A0A0B4J1H4 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv19A0A0B4J1H4 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv19A0A0B4J1H4 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv19A0A0B4J1H4 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trbv19A0A0B4J1H4 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv19A0A0B4J1H4 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv19A0A0B4J1H4 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trbv19A0A0B4J1H4 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trbv19A0A0B4J1H4 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv19A0A0B4J1H4 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv19A0A0B4J1H4 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv19A0A0B4J1H4 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trbv19A0A0B4J1H4 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms