Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Gm42569-201ENSMUST00000200539 472 ntBASIC12.18□□□□□ -0.46
Trbv3A0A0A6YYE2 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC12.18□□□□□ -0.46
Trbv3A0A0A6YYE2 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC12.18□□□□□ -0.46
Trbv3A0A0A6YYE2 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv3A0A0A6YYE2 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv3A0A0A6YYE2 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv3A0A0A6YYE2 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trbv3A0A0A6YYE2 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv3A0A0A6YYE2 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv3A0A0A6YYE2 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv3A0A0A6YYE2 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv3A0A0A6YYE2 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv3A0A0A6YYE2 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv3A0A0A6YYE2 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv3A0A0A6YYE2 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv3A0A0A6YYE2 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv3A0A0A6YYE2 Nrn1-203ENSMUST00000223611 1443 ntBASIC12.18□□□□□ -0.46
Trbv3A0A0A6YYE2 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv3A0A0A6YYE2 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv3A0A0A6YYE2 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv3A0A0A6YYE2 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv3A0A0A6YYE2 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv3A0A0A6YYE2 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trbv3A0A0A6YYE2 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv3A0A0A6YYE2 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trbv3A0A0A6YYE2 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv3A0A0A6YYE2 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trbv3A0A0A6YYE2 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv3A0A0A6YYE2 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.17□□□□□ -0.46
Trbv3A0A0A6YYE2 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv3A0A0A6YYE2 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv3A0A0A6YYE2 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv3A0A0A6YYE2 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv3A0A0A6YYE2 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.17□□□□□ -0.46
Trbv3A0A0A6YYE2 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.17□□□□□ -0.46
Trbv3A0A0A6YYE2 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv3A0A0A6YYE2 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trbv3A0A0A6YYE2 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv3A0A0A6YYE2 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv3A0A0A6YYE2 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
Trbv3A0A0A6YYE2 Gm13181-201ENSMUST00000120117 1069 ntBASIC12.17□□□□□ -0.46
Trbv3A0A0A6YYE2 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv3A0A0A6YYE2 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trbv3A0A0A6YYE2 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC12.17□□□□□ -0.46
Trbv3A0A0A6YYE2 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv3A0A0A6YYE2 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv3A0A0A6YYE2 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trbv3A0A0A6YYE2 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv3A0A0A6YYE2 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.17□□□□□ -0.46
Trbv3A0A0A6YYE2 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv3A0A0A6YYE2 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv3A0A0A6YYE2 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv3A0A0A6YYE2 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv3A0A0A6YYE2 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv3A0A0A6YYE2 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trbv3A0A0A6YYE2 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv3A0A0A6YYE2 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv3A0A0A6YYE2 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv3A0A0A6YYE2 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Trbv3A0A0A6YYE2 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv3A0A0A6YYE2 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv3A0A0A6YYE2 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trbv3A0A0A6YYE2 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.16□□□□□ -0.46
Trbv3A0A0A6YYE2 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv3A0A0A6YYE2 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trbv3A0A0A6YYE2 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv3A0A0A6YYE2 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Trbv3A0A0A6YYE2 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trbv3A0A0A6YYE2 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv3A0A0A6YYE2 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Trbv3A0A0A6YYE2 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv3A0A0A6YYE2 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv3A0A0A6YYE2 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trbv3A0A0A6YYE2 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv3A0A0A6YYE2 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.16□□□□□ -0.46
Trbv3A0A0A6YYE2 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv3A0A0A6YYE2 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv3A0A0A6YYE2 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv3A0A0A6YYE2 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv3A0A0A6YYE2 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv3A0A0A6YYE2 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.16□□□□□ -0.46
Trbv3A0A0A6YYE2 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv3A0A0A6YYE2 Gm7712-202ENSMUST00000222331 1510 ntBASIC12.16□□□□□ -0.46
Trbv3A0A0A6YYE2 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv3A0A0A6YYE2 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv3A0A0A6YYE2 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trbv3A0A0A6YYE2 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Trbv3A0A0A6YYE2 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Trbv3A0A0A6YYE2 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv3A0A0A6YYE2 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv3A0A0A6YYE2 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.15□□□□□ -0.46
Trbv3A0A0A6YYE2 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv3A0A0A6YYE2 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC12.15□□□□□ -0.46
Trbv3A0A0A6YYE2 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv3A0A0A6YYE2 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv3A0A0A6YYE2 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv3A0A0A6YYE2 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trbv3A0A0A6YYE2 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.15□□□□□ -0.46
Trbv3A0A0A6YYE2 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trbv3A0A0A6YYE2 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms