Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Gm6858-201ENSMUST00000208582 1468 ntBASIC12.2□□□□□ -0.46
Trav9d-1A0A075B699 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9d-1A0A075B699 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9d-1A0A075B699 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav9d-1A0A075B699 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav9d-1A0A075B699 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav9d-1A0A075B699 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-1A0A075B699 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-1A0A075B699 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-1A0A075B699 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-1A0A075B699 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-1A0A075B699 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-1A0A075B699 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-1A0A075B699 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-1A0A075B699 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-1A0A075B699 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-1A0A075B699 Gm11355-201ENSMUST00000121120 306 ntBASIC12.19□□□□□ -0.46
Trav9d-1A0A075B699 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-1A0A075B699 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Trav9d-1A0A075B699 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-1A0A075B699 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC12.19□□□□□ -0.46
Trav9d-1A0A075B699 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trav9d-1A0A075B699 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-1A0A075B699 Zkscan4-202ENSMUST00000225845 1506 ntBASIC12.19□□□□□ -0.46
Trav9d-1A0A075B699 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.19□□□□□ -0.46
Trav9d-1A0A075B699 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-1A0A075B699 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-1A0A075B699 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav9d-1A0A075B699 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-1A0A075B699 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-1A0A075B699 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-1A0A075B699 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-1A0A075B699 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-1A0A075B699 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-1A0A075B699 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav9d-1A0A075B699 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trav9d-1A0A075B699 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-1A0A075B699 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-1A0A075B699 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-1A0A075B699 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.18□□□□□ -0.46
Trav9d-1A0A075B699 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-1A0A075B699 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC12.18□□□□□ -0.46
Trav9d-1A0A075B699 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-1A0A075B699 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav9d-1A0A075B699 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-1A0A075B699 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-1A0A075B699 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-1A0A075B699 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-1A0A075B699 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC12.18□□□□□ -0.46
Trav9d-1A0A075B699 Gm6433-201ENSMUST00000118634 875 ntBASIC12.18□□□□□ -0.46
Trav9d-1A0A075B699 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-1A0A075B699 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav9d-1A0A075B699 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-1A0A075B699 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-1A0A075B699 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trav9d-1A0A075B699 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-1A0A075B699 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-1A0A075B699 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-1A0A075B699 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-1A0A075B699 AC132265.1-201ENSMUST00000219233 1665 ntBASIC12.18□□□□□ -0.46
Trav9d-1A0A075B699 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-1A0A075B699 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-1A0A075B699 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-1A0A075B699 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-1A0A075B699 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav9d-1A0A075B699 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-1A0A075B699 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-1A0A075B699 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-1A0A075B699 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-1A0A075B699 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-1A0A075B699 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-1A0A075B699 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav9d-1A0A075B699 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trav9d-1A0A075B699 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9d-1A0A075B699 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9d-1A0A075B699 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9d-1A0A075B699 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9d-1A0A075B699 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9d-1A0A075B699 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9d-1A0A075B699 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9d-1A0A075B699 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC12.17□□□□□ -0.46
Trav9d-1A0A075B699 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9d-1A0A075B699 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC12.17□□□□□ -0.46
Trav9d-1A0A075B699 Gm10052-201ENSMUST00000168019 960 ntBASIC12.17□□□□□ -0.46
Trav9d-1A0A075B699 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC12.17□□□□□ -0.46
Trav9d-1A0A075B699 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC12.17□□□□□ -0.46
Trav9d-1A0A075B699 Gm7729-201ENSMUST00000050143 801 ntBASIC12.17□□□□□ -0.46
Trav9d-1A0A075B699 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9d-1A0A075B699 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trav9d-1A0A075B699 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9d-1A0A075B699 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9d-1A0A075B699 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trav9d-1A0A075B699 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav9d-1A0A075B699 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9d-1A0A075B699 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9d-1A0A075B699 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Trav9d-1A0A075B699 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Trav9d-1A0A075B699 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9d-1A0A075B699 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav9d-1A0A075B699 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms