Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav18A0A075B656 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav18A0A075B656 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav18A0A075B656 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav18A0A075B656 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav18A0A075B656 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav18A0A075B656 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav18A0A075B656 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav18A0A075B656 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trav18A0A075B656 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav18A0A075B656 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Trav18A0A075B656 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav18A0A075B656 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav18A0A075B656 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav18A0A075B656 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC12.93□□□□□ -0.34
Trav18A0A075B656 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC12.93□□□□□ -0.34
Trav18A0A075B656 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC12.93□□□□□ -0.34
Trav18A0A075B656 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trav18A0A075B656 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav18A0A075B656 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav18A0A075B656 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav18A0A075B656 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav18A0A075B656 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav18A0A075B656 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav18A0A075B656 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav18A0A075B656 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav18A0A075B656 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav18A0A075B656 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav18A0A075B656 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trav18A0A075B656 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav18A0A075B656 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Trav18A0A075B656 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav18A0A075B656 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.93□□□□□ -0.34
Trav18A0A075B656 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav18A0A075B656 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.93□□□□□ -0.34
Trav18A0A075B656 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav18A0A075B656 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav18A0A075B656 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav18A0A075B656 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav18A0A075B656 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trav18A0A075B656 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC12.92□□□□□ -0.34
Trav18A0A075B656 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav18A0A075B656 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav18A0A075B656 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Trav18A0A075B656 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.92□□□□□ -0.34
Trav18A0A075B656 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav18A0A075B656 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Trav18A0A075B656 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav18A0A075B656 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav18A0A075B656 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trav18A0A075B656 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav18A0A075B656 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav18A0A075B656 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav18A0A075B656 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.92□□□□□ -0.34
Trav18A0A075B656 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav18A0A075B656 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav18A0A075B656 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav18A0A075B656 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav18A0A075B656 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav18A0A075B656 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav18A0A075B656 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav18A0A075B656 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav18A0A075B656 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav18A0A075B656 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav18A0A075B656 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav18A0A075B656 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav18A0A075B656 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav18A0A075B656 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav18A0A075B656 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav18A0A075B656 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trav18A0A075B656 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav18A0A075B656 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav18A0A075B656 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav18A0A075B656 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav18A0A075B656 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav18A0A075B656 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC12.91□□□□□ -0.34
Trav18A0A075B656 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.91□□□□□ -0.34
Trav18A0A075B656 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Trav18A0A075B656 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Trav18A0A075B656 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav18A0A075B656 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.91□□□□□ -0.34
Trav18A0A075B656 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav18A0A075B656 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trav18A0A075B656 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav18A0A075B656 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav18A0A075B656 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav18A0A075B656 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav18A0A075B656 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav18A0A075B656 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav18A0A075B656 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav18A0A075B656 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav18A0A075B656 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav18A0A075B656 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav18A0A075B656 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav18A0A075B656 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav18A0A075B656 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav18A0A075B656 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav18A0A075B656 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav18A0A075B656 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav18A0A075B656 Gm9867-201ENSMUST00000192212 2647 ntBASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms