Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav7n-4A0A075B620 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC11.97□□□□□ -0.49
Trav7n-4A0A075B620 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7n-4A0A075B620 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7n-4A0A075B620 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trav7n-4A0A075B620 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trav7n-4A0A075B620 Gm5874-201ENSMUST00000096101 508 ntBASIC11.97□□□□□ -0.49
Trav7n-4A0A075B620 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7n-4A0A075B620 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7n-4A0A075B620 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7n-4A0A075B620 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7n-4A0A075B620 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7n-4A0A075B620 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7n-4A0A075B620 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC11.97□□□□□ -0.49
Trav7n-4A0A075B620 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7n-4A0A075B620 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7n-4A0A075B620 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7n-4A0A075B620 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7n-4A0A075B620 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7n-4A0A075B620 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav7n-4A0A075B620 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav7n-4A0A075B620 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav7n-4A0A075B620 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC11.96□□□□□ -0.49
Trav7n-4A0A075B620 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC11.96□□□□□ -0.49
Trav7n-4A0A075B620 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav7n-4A0A075B620 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav7n-4A0A075B620 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav7n-4A0A075B620 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav7n-4A0A075B620 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav7n-4A0A075B620 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC11.96□□□□□ -0.49
Trav7n-4A0A075B620 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trav7n-4A0A075B620 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav7n-4A0A075B620 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Trav7n-4A0A075B620 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav7n-4A0A075B620 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC11.96□□□□□ -0.49
Trav7n-4A0A075B620 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav7n-4A0A075B620 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav7n-4A0A075B620 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav7n-4A0A075B620 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC11.96□□□□□ -0.49
Trav7n-4A0A075B620 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.49
Trav7n-4A0A075B620 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC11.96□□□□□ -0.49
Trav7n-4A0A075B620 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Trav7n-4A0A075B620 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav7n-4A0A075B620 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav7n-4A0A075B620 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav7n-4A0A075B620 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav7n-4A0A075B620 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav7n-4A0A075B620 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav7n-4A0A075B620 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav7n-4A0A075B620 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav7n-4A0A075B620 Gm32996-201ENSMUST00000199828 1447 ntBASIC11.95□□□□□ -0.5
Trav7n-4A0A075B620 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav7n-4A0A075B620 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav7n-4A0A075B620 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav7n-4A0A075B620 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav7n-4A0A075B620 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav7n-4A0A075B620 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav7n-4A0A075B620 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav7n-4A0A075B620 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav7n-4A0A075B620 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav7n-4A0A075B620 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav7n-4A0A075B620 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav7n-4A0A075B620 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav7n-4A0A075B620 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav7n-4A0A075B620 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav7n-4A0A075B620 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav7n-4A0A075B620 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav7n-4A0A075B620 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav7n-4A0A075B620 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav7n-4A0A075B620 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav7n-4A0A075B620 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav7n-4A0A075B620 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav7n-4A0A075B620 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav7n-4A0A075B620 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav7n-4A0A075B620 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC11.95□□□□□ -0.5
Trav7n-4A0A075B620 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav7n-4A0A075B620 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav7n-4A0A075B620 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trav7n-4A0A075B620 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav7n-4A0A075B620 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trav7n-4A0A075B620 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav7n-4A0A075B620 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav7n-4A0A075B620 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav7n-4A0A075B620 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav7n-4A0A075B620 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav7n-4A0A075B620 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav7n-4A0A075B620 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav7n-4A0A075B620 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav7n-4A0A075B620 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav7n-4A0A075B620 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav7n-4A0A075B620 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Trav7n-4A0A075B620 Gm7638-201ENSMUST00000121348 967 ntBASIC11.94□□□□□ -0.5
Trav7n-4A0A075B620 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav7n-4A0A075B620 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav7n-4A0A075B620 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav7n-4A0A075B620 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trav7n-4A0A075B620 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav7n-4A0A075B620 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trav7n-4A0A075B620 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav7n-4A0A075B620 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms