Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PdfS4R2K0 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
PdfS4R2K0 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC12.12□□□□□ -0.47
PdfS4R2K0 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PdfS4R2K0 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PdfS4R2K0 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PdfS4R2K0 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
PdfS4R2K0 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PdfS4R2K0 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PdfS4R2K0 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PdfS4R2K0 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
PdfS4R2K0 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
PdfS4R2K0 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PdfS4R2K0 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PdfS4R2K0 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
PdfS4R2K0 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
PdfS4R2K0 Gm13836-201ENSMUST00000121159 501 ntBASIC12.12□□□□□ -0.47
PdfS4R2K0 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
PdfS4R2K0 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
PdfS4R2K0 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PdfS4R2K0 AC135963.1-201ENSMUST00000211640 717 ntBASIC12.12□□□□□ -0.47
PdfS4R2K0 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
PdfS4R2K0 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
PdfS4R2K0 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC12.12□□□□□ -0.47
PdfS4R2K0 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.12□□□□□ -0.47
PdfS4R2K0 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PdfS4R2K0 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
PdfS4R2K0 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PdfS4R2K0 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
PdfS4R2K0 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
PdfS4R2K0 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
PdfS4R2K0 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
PdfS4R2K0 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PdfS4R2K0 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PdfS4R2K0 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
PdfS4R2K0 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PdfS4R2K0 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
PdfS4R2K0 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
PdfS4R2K0 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
PdfS4R2K0 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
PdfS4R2K0 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PdfS4R2K0 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PdfS4R2K0 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC12.11□□□□□ -0.47
PdfS4R2K0 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PdfS4R2K0 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
PdfS4R2K0 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC12.11□□□□□ -0.47
PdfS4R2K0 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PdfS4R2K0 Gm27463-201ENSMUST00000183569 57 ntBASIC12.11□□□□□ -0.47
PdfS4R2K0 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC12.11□□□□□ -0.47
PdfS4R2K0 Gm9484-201ENSMUST00000195892 1159 ntBASIC12.11□□□□□ -0.47
PdfS4R2K0 Gm3375-201ENSMUST00000203929 796 ntBASIC12.11□□□□□ -0.47
PdfS4R2K0 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PdfS4R2K0 Gm30025-201ENSMUST00000218555 728 ntBASIC12.11□□□□□ -0.47
PdfS4R2K0 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PdfS4R2K0 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PdfS4R2K0 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
PdfS4R2K0 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
PdfS4R2K0 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PdfS4R2K0 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
PdfS4R2K0 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PdfS4R2K0 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC12.11□□□□□ -0.47
PdfS4R2K0 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.11□□□□□ -0.47
PdfS4R2K0 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
PdfS4R2K0 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PdfS4R2K0 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
PdfS4R2K0 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
PdfS4R2K0 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PdfS4R2K0 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PdfS4R2K0 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.1□□□□□ -0.47
PdfS4R2K0 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
PdfS4R2K0 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
PdfS4R2K0 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC12.1□□□□□ -0.47
PdfS4R2K0 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PdfS4R2K0 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
PdfS4R2K0 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
PdfS4R2K0 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PdfS4R2K0 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
PdfS4R2K0 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
PdfS4R2K0 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
PdfS4R2K0 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
PdfS4R2K0 Gm6433-201ENSMUST00000118634 875 ntBASIC12.1□□□□□ -0.47
PdfS4R2K0 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
PdfS4R2K0 Gm24841-201ENSMUST00000158676 357 ntBASIC12.1□□□□□ -0.47
PdfS4R2K0 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
PdfS4R2K0 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC12.1□□□□□ -0.47
PdfS4R2K0 Gm10517-202ENSMUST00000192970 758 ntBASIC12.1□□□□□ -0.47
PdfS4R2K0 Gm9694-201ENSMUST00000193347 1189 ntBASIC12.1□□□□□ -0.47
PdfS4R2K0 Gm37025-201ENSMUST00000195159 829 ntBASIC12.1□□□□□ -0.47
PdfS4R2K0 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PdfS4R2K0 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PdfS4R2K0 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
PdfS4R2K0 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PdfS4R2K0 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
PdfS4R2K0 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
PdfS4R2K0 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.1□□□□□ -0.47
PdfS4R2K0 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PdfS4R2K0 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PdfS4R2K0 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PdfS4R2K0 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
PdfS4R2K0 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms