Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb2S4R1M3 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb2S4R1M3 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb2S4R1M3 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.79■□□□□ 0.12
H2afb2S4R1M3 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb2S4R1M3 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb2S4R1M3 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb2S4R1M3 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb2S4R1M3 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb2S4R1M3 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.79■□□□□ 0.12
H2afb2S4R1M3 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
H2afb2S4R1M3 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
H2afb2S4R1M3 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb2S4R1M3 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb2S4R1M3 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb2S4R1M3 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.79■□□□□ 0.12
H2afb2S4R1M3 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb2S4R1M3 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb2S4R1M3 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb2S4R1M3 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb2S4R1M3 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb2S4R1M3 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb2S4R1M3 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb2S4R1M3 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb2S4R1M3 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
H2afb2S4R1M3 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2afb2S4R1M3 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2afb2S4R1M3 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
H2afb2S4R1M3 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2afb2S4R1M3 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2afb2S4R1M3 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2afb2S4R1M3 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2afb2S4R1M3 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2afb2S4R1M3 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
H2afb2S4R1M3 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
H2afb2S4R1M3 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2afb2S4R1M3 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
H2afb2S4R1M3 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2afb2S4R1M3 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
H2afb2S4R1M3 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2afb2S4R1M3 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2afb2S4R1M3 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
H2afb2S4R1M3 Gm14859-201ENSMUST00000117752 357 ntBASIC15.78■□□□□ 0.12
H2afb2S4R1M3 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
H2afb2S4R1M3 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.78■□□□□ 0.12
H2afb2S4R1M3 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.78■□□□□ 0.12
H2afb2S4R1M3 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2afb2S4R1M3 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2afb2S4R1M3 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2afb2S4R1M3 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2afb2S4R1M3 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
H2afb2S4R1M3 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
H2afb2S4R1M3 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
H2afb2S4R1M3 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
H2afb2S4R1M3 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
H2afb2S4R1M3 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
H2afb2S4R1M3 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
H2afb2S4R1M3 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
H2afb2S4R1M3 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
H2afb2S4R1M3 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
H2afb2S4R1M3 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
H2afb2S4R1M3 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
H2afb2S4R1M3 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
H2afb2S4R1M3 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
H2afb2S4R1M3 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
H2afb2S4R1M3 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.77■□□□□ 0.12
H2afb2S4R1M3 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.77■□□□□ 0.12
H2afb2S4R1M3 Gm7977-201ENSMUST00000193787 748 ntBASIC15.77■□□□□ 0.12
H2afb2S4R1M3 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
H2afb2S4R1M3 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
H2afb2S4R1M3 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
H2afb2S4R1M3 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
H2afb2S4R1M3 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.11
H2afb2S4R1M3 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
H2afb2S4R1M3 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
H2afb2S4R1M3 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
H2afb2S4R1M3 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
H2afb2S4R1M3 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
H2afb2S4R1M3 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
H2afb2S4R1M3 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
H2afb2S4R1M3 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
H2afb2S4R1M3 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.77■□□□□ 0.11
H2afb2S4R1M3 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
H2afb2S4R1M3 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
H2afb2S4R1M3 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
H2afb2S4R1M3 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.76■□□□□ 0.11
H2afb2S4R1M3 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
H2afb2S4R1M3 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.76■□□□□ 0.11
H2afb2S4R1M3 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
H2afb2S4R1M3 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
H2afb2S4R1M3 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.76■□□□□ 0.11
H2afb2S4R1M3 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.76■□□□□ 0.11
H2afb2S4R1M3 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.76■□□□□ 0.11
H2afb2S4R1M3 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.76■□□□□ 0.11
H2afb2S4R1M3 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.76■□□□□ 0.11
H2afb2S4R1M3 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.76■□□□□ 0.11
H2afb2S4R1M3 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.76■□□□□ 0.11
H2afb2S4R1M3 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.76■□□□□ 0.11
H2afb2S4R1M3 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
H2afb2S4R1M3 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms