Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nr1h3Q9Z0Y9 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nr1h3Q9Z0Y9 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nr1h3Q9Z0Y9 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nr1h3Q9Z0Y9 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nr1h3Q9Z0Y9 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nr1h3Q9Z0Y9 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nr1h3Q9Z0Y9 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nr1h3Q9Z0Y9 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nr1h3Q9Z0Y9 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nr1h3Q9Z0Y9 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nr1h3Q9Z0Y9 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.12■□□□□ 0.33
Nr1h3Q9Z0Y9 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Nr1h3Q9Z0Y9 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC17.12■□□□□ 0.33
Nr1h3Q9Z0Y9 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nr1h3Q9Z0Y9 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC17.12■□□□□ 0.33
Nr1h3Q9Z0Y9 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.12■□□□□ 0.33
Nr1h3Q9Z0Y9 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nr1h3Q9Z0Y9 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nr1h3Q9Z0Y9 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC17.12■□□□□ 0.33
Nr1h3Q9Z0Y9 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC17.12■□□□□ 0.33
Nr1h3Q9Z0Y9 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nr1h3Q9Z0Y9 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nr1h3Q9Z0Y9 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nr1h3Q9Z0Y9 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nr1h3Q9Z0Y9 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Nr1h3Q9Z0Y9 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nr1h3Q9Z0Y9 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nr1h3Q9Z0Y9 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nr1h3Q9Z0Y9 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nr1h3Q9Z0Y9 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nr1h3Q9Z0Y9 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Nr1h3Q9Z0Y9 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nr1h3Q9Z0Y9 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nr1h3Q9Z0Y9 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nr1h3Q9Z0Y9 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nr1h3Q9Z0Y9 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nr1h3Q9Z0Y9 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.11■□□□□ 0.33
Nr1h3Q9Z0Y9 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nr1h3Q9Z0Y9 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Nr1h3Q9Z0Y9 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nr1h3Q9Z0Y9 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Nr1h3Q9Z0Y9 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC17.11■□□□□ 0.33
Nr1h3Q9Z0Y9 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nr1h3Q9Z0Y9 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nr1h3Q9Z0Y9 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nr1h3Q9Z0Y9 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nr1h3Q9Z0Y9 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nr1h3Q9Z0Y9 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nr1h3Q9Z0Y9 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nr1h3Q9Z0Y9 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Nr1h3Q9Z0Y9 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nr1h3Q9Z0Y9 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Nr1h3Q9Z0Y9 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nr1h3Q9Z0Y9 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nr1h3Q9Z0Y9 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Nr1h3Q9Z0Y9 Gm11764-201ENSMUST00000120221 623 ntBASIC17.1■□□□□ 0.33
Nr1h3Q9Z0Y9 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.1■□□□□ 0.33
Nr1h3Q9Z0Y9 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC17.1■□□□□ 0.33
Nr1h3Q9Z0Y9 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
Nr1h3Q9Z0Y9 Gm24513-201ENSMUST00000174964 138 ntBASIC17.1■□□□□ 0.33
Nr1h3Q9Z0Y9 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC17.1■□□□□ 0.33
Nr1h3Q9Z0Y9 Gm27397-201ENSMUST00000184997 107 ntBASIC17.1■□□□□ 0.33
Nr1h3Q9Z0Y9 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Nr1h3Q9Z0Y9 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nr1h3Q9Z0Y9 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC17.1■□□□□ 0.33
Nr1h3Q9Z0Y9 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nr1h3Q9Z0Y9 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nr1h3Q9Z0Y9 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nr1h3Q9Z0Y9 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Nr1h3Q9Z0Y9 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nr1h3Q9Z0Y9 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.1■□□□□ 0.33
Nr1h3Q9Z0Y9 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nr1h3Q9Z0Y9 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nr1h3Q9Z0Y9 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
Nr1h3Q9Z0Y9 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nr1h3Q9Z0Y9 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Nr1h3Q9Z0Y9 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nr1h3Q9Z0Y9 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nr1h3Q9Z0Y9 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nr1h3Q9Z0Y9 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Nr1h3Q9Z0Y9 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC17.09■□□□□ 0.33
Nr1h3Q9Z0Y9 Gm43575-201ENSMUST00000196420 516 ntBASIC17.09■□□□□ 0.33
Nr1h3Q9Z0Y9 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nr1h3Q9Z0Y9 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.09■□□□□ 0.33
Nr1h3Q9Z0Y9 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nr1h3Q9Z0Y9 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Nr1h3Q9Z0Y9 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nr1h3Q9Z0Y9 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nr1h3Q9Z0Y9 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nr1h3Q9Z0Y9 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.09■□□□□ 0.33
Nr1h3Q9Z0Y9 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nr1h3Q9Z0Y9 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nr1h3Q9Z0Y9 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nr1h3Q9Z0Y9 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nr1h3Q9Z0Y9 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nr1h3Q9Z0Y9 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nr1h3Q9Z0Y9 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nr1h3Q9Z0Y9 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nr1h3Q9Z0Y9 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms