Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Gm11950-201ENSMUST00000121615 838 ntBASIC15.39■□□□□ 0.05
Cdh17Q9R100 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh17Q9R100 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.39■□□□□ 0.05
Cdh17Q9R100 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Cdh17Q9R100 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh17Q9R100 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.39■□□□□ 0.05
Cdh17Q9R100 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh17Q9R100 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh17Q9R100 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh17Q9R100 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh17Q9R100 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh17Q9R100 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh17Q9R100 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh17Q9R100 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh17Q9R100 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh17Q9R100 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.39■□□□□ 0.05
Cdh17Q9R100 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh17Q9R100 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdh17Q9R100 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdh17Q9R100 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.38■□□□□ 0.05
Cdh17Q9R100 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.38■□□□□ 0.05
Cdh17Q9R100 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdh17Q9R100 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cdh17Q9R100 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdh17Q9R100 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdh17Q9R100 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdh17Q9R100 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cdh17Q9R100 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.38■□□□□ 0.05
Cdh17Q9R100 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cdh17Q9R100 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdh17Q9R100 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.38■□□□□ 0.05
Cdh17Q9R100 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdh17Q9R100 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdh17Q9R100 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdh17Q9R100 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdh17Q9R100 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.38■□□□□ 0.05
Cdh17Q9R100 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdh17Q9R100 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cdh17Q9R100 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cdh17Q9R100 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cdh17Q9R100 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Cdh17Q9R100 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cdh17Q9R100 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdh17Q9R100 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdh17Q9R100 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cdh17Q9R100 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdh17Q9R100 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Cdh17Q9R100 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdh17Q9R100 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.38■□□□□ 0.05
Cdh17Q9R100 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cdh17Q9R100 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdh17Q9R100 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cdh17Q9R100 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdh17Q9R100 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Cdh17Q9R100 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Cdh17Q9R100 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdh17Q9R100 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
Cdh17Q9R100 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdh17Q9R100 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdh17Q9R100 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdh17Q9R100 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Cdh17Q9R100 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Cdh17Q9R100 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Cdh17Q9R100 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cdh17Q9R100 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cdh17Q9R100 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cdh17Q9R100 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.37■□□□□ 0.05
Cdh17Q9R100 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cdh17Q9R100 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Cdh17Q9R100 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Cdh17Q9R100 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdh17Q9R100 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Cdh17Q9R100 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.37■□□□□ 0.05
Cdh17Q9R100 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdh17Q9R100 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdh17Q9R100 BC037039-201ENSMUST00000192003 2205 ntBASIC15.37■□□□□ 0.05
Cdh17Q9R100 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdh17Q9R100 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Cdh17Q9R100 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cdh17Q9R100 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Cdh17Q9R100 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Cdh17Q9R100 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
Cdh17Q9R100 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdh17Q9R100 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cdh17Q9R100 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Cdh17Q9R100 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.36■□□□□ 0.05
Cdh17Q9R100 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdh17Q9R100 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Cdh17Q9R100 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdh17Q9R100 Gm17808-201ENSMUST00000200859 894 ntBASIC15.36■□□□□ 0.05
Cdh17Q9R100 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.36■□□□□ 0.05
Cdh17Q9R100 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.36■□□□□ 0.05
Cdh17Q9R100 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Cdh17Q9R100 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdh17Q9R100 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdh17Q9R100 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdh17Q9R100 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdh17Q9R100 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdh17Q9R100 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Cdh17Q9R100 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms