Protein–RNA interactions for Protein: Q9QXA5

Lsm4, U6 snRNA-associated Sm-like protein LSm4, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm4Q9QXA5 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm4Q9QXA5 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm4Q9QXA5 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm4Q9QXA5 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm4Q9QXA5 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Lsm4Q9QXA5 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm4Q9QXA5 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Lsm4Q9QXA5 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm4Q9QXA5 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm4Q9QXA5 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm4Q9QXA5 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm4Q9QXA5 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm4Q9QXA5 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm4Q9QXA5 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm4Q9QXA5 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC12.48□□□□□ -0.41
Lsm4Q9QXA5 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC12.48□□□□□ -0.41
Lsm4Q9QXA5 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC12.48□□□□□ -0.41
Lsm4Q9QXA5 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC12.48□□□□□ -0.41
Lsm4Q9QXA5 Gm2274-201ENSMUST00000184539 609 ntBASIC12.48□□□□□ -0.41
Lsm4Q9QXA5 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm4Q9QXA5 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm4Q9QXA5 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm4Q9QXA5 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm4Q9QXA5 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm4Q9QXA5 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm4Q9QXA5 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm4Q9QXA5 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm4Q9QXA5 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.48□□□□□ -0.41
Lsm4Q9QXA5 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Lsm4Q9QXA5 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm4Q9QXA5 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC12.48□□□□□ -0.41
Lsm4Q9QXA5 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm4Q9QXA5 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Lsm4Q9QXA5 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm4Q9QXA5 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Lsm4Q9QXA5 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm4Q9QXA5 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.47□□□□□ -0.41
Lsm4Q9QXA5 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm4Q9QXA5 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm4Q9QXA5 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm4Q9QXA5 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm4Q9QXA5 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm4Q9QXA5 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm4Q9QXA5 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm4Q9QXA5 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm4Q9QXA5 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Lsm4Q9QXA5 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC12.47□□□□□ -0.41
Lsm4Q9QXA5 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm4Q9QXA5 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm4Q9QXA5 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm4Q9QXA5 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm4Q9QXA5 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm4Q9QXA5 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm4Q9QXA5 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Lsm4Q9QXA5 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm4Q9QXA5 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm4Q9QXA5 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm4Q9QXA5 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm4Q9QXA5 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm4Q9QXA5 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lsm4Q9QXA5 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.47□□□□□ -0.41
Lsm4Q9QXA5 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm4Q9QXA5 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Lsm4Q9QXA5 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm4Q9QXA5 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm4Q9QXA5 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm4Q9QXA5 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.46□□□□□ -0.41
Lsm4Q9QXA5 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm4Q9QXA5 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm4Q9QXA5 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm4Q9QXA5 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm4Q9QXA5 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Lsm4Q9QXA5 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC12.46□□□□□ -0.41
Lsm4Q9QXA5 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm4Q9QXA5 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC12.46□□□□□ -0.41
Lsm4Q9QXA5 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm4Q9QXA5 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm4Q9QXA5 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC12.46□□□□□ -0.41
Lsm4Q9QXA5 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm4Q9QXA5 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm4Q9QXA5 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm4Q9QXA5 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC12.46□□□□□ -0.41
Lsm4Q9QXA5 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Lsm4Q9QXA5 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm4Q9QXA5 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lsm4Q9QXA5 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Lsm4Q9QXA5 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Lsm4Q9QXA5 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lsm4Q9QXA5 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lsm4Q9QXA5 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Lsm4Q9QXA5 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lsm4Q9QXA5 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lsm4Q9QXA5 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.46□□□□□ -0.42
Lsm4Q9QXA5 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lsm4Q9QXA5 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.46□□□□□ -0.42
Lsm4Q9QXA5 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lsm4Q9QXA5 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Lsm4Q9QXA5 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lsm4Q9QXA5 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lsm4Q9QXA5 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms