Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trem1Q9JKE2 Gm5422-201ENSMUST00000050717 2721 ntBASIC14.21□□□□□ -0.14
Trem1Q9JKE2 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trem1Q9JKE2 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.2□□□□□ -0.14
Trem1Q9JKE2 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trem1Q9JKE2 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trem1Q9JKE2 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
Trem1Q9JKE2 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trem1Q9JKE2 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trem1Q9JKE2 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trem1Q9JKE2 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trem1Q9JKE2 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
Trem1Q9JKE2 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trem1Q9JKE2 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trem1Q9JKE2 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trem1Q9JKE2 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trem1Q9JKE2 Gm42555-201ENSMUST00000199304 1039 ntBASIC14.2□□□□□ -0.14
Trem1Q9JKE2 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trem1Q9JKE2 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trem1Q9JKE2 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC14.2□□□□□ -0.14
Trem1Q9JKE2 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trem1Q9JKE2 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trem1Q9JKE2 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trem1Q9JKE2 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trem1Q9JKE2 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trem1Q9JKE2 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trem1Q9JKE2 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.2□□□□□ -0.14
Trem1Q9JKE2 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trem1Q9JKE2 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trem1Q9JKE2 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trem1Q9JKE2 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trem1Q9JKE2 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trem1Q9JKE2 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trem1Q9JKE2 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trem1Q9JKE2 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trem1Q9JKE2 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.19□□□□□ -0.14
Trem1Q9JKE2 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trem1Q9JKE2 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.19□□□□□ -0.14
Trem1Q9JKE2 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trem1Q9JKE2 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trem1Q9JKE2 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trem1Q9JKE2 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trem1Q9JKE2 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trem1Q9JKE2 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trem1Q9JKE2 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trem1Q9JKE2 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trem1Q9JKE2 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC14.19□□□□□ -0.14
Trem1Q9JKE2 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.19□□□□□ -0.14
Trem1Q9JKE2 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trem1Q9JKE2 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trem1Q9JKE2 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trem1Q9JKE2 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trem1Q9JKE2 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trem1Q9JKE2 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trem1Q9JKE2 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trem1Q9JKE2 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trem1Q9JKE2 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.19□□□□□ -0.14
Trem1Q9JKE2 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trem1Q9JKE2 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.19□□□□□ -0.14
Trem1Q9JKE2 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trem1Q9JKE2 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trem1Q9JKE2 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trem1Q9JKE2 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trem1Q9JKE2 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trem1Q9JKE2 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trem1Q9JKE2 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trem1Q9JKE2 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trem1Q9JKE2 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trem1Q9JKE2 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.18□□□□□ -0.14
Trem1Q9JKE2 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trem1Q9JKE2 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Trem1Q9JKE2 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trem1Q9JKE2 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trem1Q9JKE2 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trem1Q9JKE2 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trem1Q9JKE2 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trem1Q9JKE2 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Trem1Q9JKE2 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trem1Q9JKE2 Gm12134-201ENSMUST00000122109 520 ntBASIC14.18□□□□□ -0.14
Trem1Q9JKE2 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trem1Q9JKE2 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC14.18□□□□□ -0.14
Trem1Q9JKE2 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.18□□□□□ -0.14
Trem1Q9JKE2 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trem1Q9JKE2 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trem1Q9JKE2 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trem1Q9JKE2 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trem1Q9JKE2 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.18□□□□□ -0.14
Trem1Q9JKE2 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trem1Q9JKE2 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trem1Q9JKE2 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trem1Q9JKE2 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.18□□□□□ -0.14
Trem1Q9JKE2 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trem1Q9JKE2 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trem1Q9JKE2 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Trem1Q9JKE2 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Trem1Q9JKE2 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.18□□□□□ -0.14
Trem1Q9JKE2 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trem1Q9JKE2 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trem1Q9JKE2 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trem1Q9JKE2 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms