Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mbd3l1Q9D9H3 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.67□□□□□ -0.22
Mbd3l1Q9D9H3 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Mbd3l1Q9D9H3 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Mbd3l1Q9D9H3 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.67□□□□□ -0.22
Mbd3l1Q9D9H3 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mbd3l1Q9D9H3 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mbd3l1Q9D9H3 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Mbd3l1Q9D9H3 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC13.67□□□□□ -0.22
Mbd3l1Q9D9H3 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Mbd3l1Q9D9H3 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mbd3l1Q9D9H3 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mbd3l1Q9D9H3 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Mbd3l1Q9D9H3 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mbd3l1Q9D9H3 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Mbd3l1Q9D9H3 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Mbd3l1Q9D9H3 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mbd3l1Q9D9H3 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mbd3l1Q9D9H3 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mbd3l1Q9D9H3 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.67□□□□□ -0.22
Mbd3l1Q9D9H3 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Mbd3l1Q9D9H3 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mbd3l1Q9D9H3 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mbd3l1Q9D9H3 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Mbd3l1Q9D9H3 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mbd3l1Q9D9H3 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mbd3l1Q9D9H3 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.67□□□□□ -0.22
Mbd3l1Q9D9H3 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mbd3l1Q9D9H3 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Mbd3l1Q9D9H3 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.66□□□□□ -0.22
Mbd3l1Q9D9H3 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Mbd3l1Q9D9H3 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Mbd3l1Q9D9H3 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Mbd3l1Q9D9H3 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Mbd3l1Q9D9H3 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Mbd3l1Q9D9H3 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Mbd3l1Q9D9H3 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Mbd3l1Q9D9H3 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Mbd3l1Q9D9H3 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Mbd3l1Q9D9H3 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC13.66□□□□□ -0.22
Mbd3l1Q9D9H3 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
Mbd3l1Q9D9H3 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Mbd3l1Q9D9H3 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Mbd3l1Q9D9H3 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Mbd3l1Q9D9H3 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Mbd3l1Q9D9H3 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Mbd3l1Q9D9H3 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Mbd3l1Q9D9H3 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Mbd3l1Q9D9H3 Efs-202ENSMUST00000227037 2540 ntBASIC13.66□□□□□ -0.22
Mbd3l1Q9D9H3 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Mbd3l1Q9D9H3 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Mbd3l1Q9D9H3 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Mbd3l1Q9D9H3 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Mbd3l1Q9D9H3 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Mbd3l1Q9D9H3 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Mbd3l1Q9D9H3 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Mbd3l1Q9D9H3 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Mbd3l1Q9D9H3 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Mbd3l1Q9D9H3 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Mbd3l1Q9D9H3 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Mbd3l1Q9D9H3 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.65□□□□□ -0.22
Mbd3l1Q9D9H3 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Mbd3l1Q9D9H3 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Mbd3l1Q9D9H3 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Mbd3l1Q9D9H3 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Mbd3l1Q9D9H3 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Mbd3l1Q9D9H3 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Mbd3l1Q9D9H3 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Mbd3l1Q9D9H3 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Mbd3l1Q9D9H3 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Mbd3l1Q9D9H3 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Mbd3l1Q9D9H3 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Mbd3l1Q9D9H3 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Mbd3l1Q9D9H3 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.65□□□□□ -0.22
Mbd3l1Q9D9H3 Gm12922-201ENSMUST00000120626 809 ntBASIC13.65□□□□□ -0.22
Mbd3l1Q9D9H3 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC13.65□□□□□ -0.22
Mbd3l1Q9D9H3 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC13.65□□□□□ -0.22
Mbd3l1Q9D9H3 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Mbd3l1Q9D9H3 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Mbd3l1Q9D9H3 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Mbd3l1Q9D9H3 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Mbd3l1Q9D9H3 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Mbd3l1Q9D9H3 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Mbd3l1Q9D9H3 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Mbd3l1Q9D9H3 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Mbd3l1Q9D9H3 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Mbd3l1Q9D9H3 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Mbd3l1Q9D9H3 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Mbd3l1Q9D9H3 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Mbd3l1Q9D9H3 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
Mbd3l1Q9D9H3 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Mbd3l1Q9D9H3 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mbd3l1Q9D9H3 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mbd3l1Q9D9H3 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Mbd3l1Q9D9H3 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mbd3l1Q9D9H3 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mbd3l1Q9D9H3 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Mbd3l1Q9D9H3 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Mbd3l1Q9D9H3 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Mbd3l1Q9D9H3 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms