Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp4bQ9D8B3 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp4bQ9D8B3 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC19.86■□□□□ 0.77
Chmp4bQ9D8B3 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp4bQ9D8B3 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC19.86■□□□□ 0.77
Chmp4bQ9D8B3 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC19.86■□□□□ 0.77
Chmp4bQ9D8B3 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC19.86■□□□□ 0.77
Chmp4bQ9D8B3 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp4bQ9D8B3 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp4bQ9D8B3 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp4bQ9D8B3 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp4bQ9D8B3 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp4bQ9D8B3 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp4bQ9D8B3 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp4bQ9D8B3 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp4bQ9D8B3 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp4bQ9D8B3 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp4bQ9D8B3 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp4bQ9D8B3 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp4bQ9D8B3 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp4bQ9D8B3 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp4bQ9D8B3 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
Chmp4bQ9D8B3 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp4bQ9D8B3 AC108846.1-201ENSMUST00000214531 513 ntBASIC19.85■□□□□ 0.77
Chmp4bQ9D8B3 AC127302.2-201ENSMUST00000215212 268 ntBASIC19.85■□□□□ 0.77
Chmp4bQ9D8B3 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Chmp4bQ9D8B3 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp4bQ9D8B3 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp4bQ9D8B3 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp4bQ9D8B3 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp4bQ9D8B3 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp4bQ9D8B3 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp4bQ9D8B3 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp4bQ9D8B3 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp4bQ9D8B3 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp4bQ9D8B3 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp4bQ9D8B3 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp4bQ9D8B3 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Chmp4bQ9D8B3 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC19.84■□□□□ 0.77
Chmp4bQ9D8B3 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
Chmp4bQ9D8B3 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp4bQ9D8B3 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Chmp4bQ9D8B3 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp4bQ9D8B3 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp4bQ9D8B3 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp4bQ9D8B3 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC19.84■□□□□ 0.77
Chmp4bQ9D8B3 Gm15165-201ENSMUST00000118140 502 ntBASIC19.84■□□□□ 0.77
Chmp4bQ9D8B3 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC19.84■□□□□ 0.77
Chmp4bQ9D8B3 AC153889.1-201ENSMUST00000219257 330 ntBASIC19.84■□□□□ 0.77
Chmp4bQ9D8B3 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp4bQ9D8B3 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp4bQ9D8B3 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Chmp4bQ9D8B3 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp4bQ9D8B3 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Chmp4bQ9D8B3 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Chmp4bQ9D8B3 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC19.83■□□□□ 0.77
Chmp4bQ9D8B3 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Chmp4bQ9D8B3 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Chmp4bQ9D8B3 Prob1-201ENSMUST00000097619 3021 ntBASIC19.83■□□□□ 0.77
Chmp4bQ9D8B3 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Chmp4bQ9D8B3 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Chmp4bQ9D8B3 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Chmp4bQ9D8B3 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Chmp4bQ9D8B3 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
Chmp4bQ9D8B3 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC19.83■□□□□ 0.77
Chmp4bQ9D8B3 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC19.83■□□□□ 0.77
Chmp4bQ9D8B3 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Chmp4bQ9D8B3 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Chmp4bQ9D8B3 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Chmp4bQ9D8B3 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Chmp4bQ9D8B3 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Chmp4bQ9D8B3 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Chmp4bQ9D8B3 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Chmp4bQ9D8B3 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp4bQ9D8B3 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp4bQ9D8B3 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp4bQ9D8B3 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp4bQ9D8B3 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Chmp4bQ9D8B3 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp4bQ9D8B3 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp4bQ9D8B3 Gm4609-201ENSMUST00000106443 1002 ntBASIC19.82■□□□□ 0.76
Chmp4bQ9D8B3 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Chmp4bQ9D8B3 Gm5138-201ENSMUST00000113842 1002 ntBASIC19.82■□□□□ 0.76
Chmp4bQ9D8B3 Gm15191-201ENSMUST00000117933 1000 ntBASIC19.82■□□□□ 0.76
Chmp4bQ9D8B3 Gm12182-201ENSMUST00000118655 1008 ntBASIC19.82■□□□□ 0.76
Chmp4bQ9D8B3 Gm13882-201ENSMUST00000120886 1002 ntBASIC19.82■□□□□ 0.76
Chmp4bQ9D8B3 Gm10284-201ENSMUST00000145057 1005 ntBASIC19.82■□□□□ 0.76
Chmp4bQ9D8B3 Gm10481-201ENSMUST00000179228 1002 ntBASIC19.82■□□□□ 0.76
Chmp4bQ9D8B3 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC19.82■□□□□ 0.76
Chmp4bQ9D8B3 Gm2574-201ENSMUST00000181051 1002 ntBASIC19.82■□□□□ 0.76
Chmp4bQ9D8B3 Gm3200-201ENSMUST00000181493 1002 ntBASIC19.82■□□□□ 0.76
Chmp4bQ9D8B3 Gm8825-201ENSMUST00000182565 998 ntBASIC19.82■□□□□ 0.76
Chmp4bQ9D8B3 Gm4518-201ENSMUST00000182638 718 ntBASIC19.82■□□□□ 0.76
Chmp4bQ9D8B3 Gm8330-201ENSMUST00000182754 1008 ntBASIC19.82■□□□□ 0.76
Chmp4bQ9D8B3 Gm4575-201ENSMUST00000182991 1002 ntBASIC19.82■□□□□ 0.76
Chmp4bQ9D8B3 Gm8709-201ENSMUST00000183230 1012 ntBASIC19.82■□□□□ 0.76
Chmp4bQ9D8B3 Gm7977-201ENSMUST00000193787 748 ntBASIC19.82■□□□□ 0.76
Chmp4bQ9D8B3 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.82■□□□□ 0.76
Chmp4bQ9D8B3 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC19.82■□□□□ 0.76
Chmp4bQ9D8B3 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms