Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssu72Q9CY97 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssu72Q9CY97 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssu72Q9CY97 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ssu72Q9CY97 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssu72Q9CY97 Gm10052-201ENSMUST00000168019 960 ntBASIC15.68■□□□□ 0.1
Ssu72Q9CY97 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssu72Q9CY97 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
Ssu72Q9CY97 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.68■□□□□ 0.1
Ssu72Q9CY97 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ssu72Q9CY97 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Ssu72Q9CY97 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.68■□□□□ 0.1
Ssu72Q9CY97 Gm7729-201ENSMUST00000050143 801 ntBASIC15.68■□□□□ 0.1
Ssu72Q9CY97 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssu72Q9CY97 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC15.68■□□□□ 0.1
Ssu72Q9CY97 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssu72Q9CY97 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssu72Q9CY97 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Ssu72Q9CY97 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssu72Q9CY97 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.68■□□□□ 0.1
Ssu72Q9CY97 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssu72Q9CY97 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssu72Q9CY97 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.68■□□□□ 0.1
Ssu72Q9CY97 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssu72Q9CY97 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.68■□□□□ 0.1
Ssu72Q9CY97 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssu72Q9CY97 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssu72Q9CY97 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ssu72Q9CY97 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.67■□□□□ 0.1
Ssu72Q9CY97 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Ssu72Q9CY97 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ssu72Q9CY97 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ssu72Q9CY97 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ssu72Q9CY97 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ssu72Q9CY97 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.67■□□□□ 0.1
Ssu72Q9CY97 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ssu72Q9CY97 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Ssu72Q9CY97 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ssu72Q9CY97 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.67■□□□□ 0.1
Ssu72Q9CY97 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.67■□□□□ 0.1
Ssu72Q9CY97 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC15.67■□□□□ 0.1
Ssu72Q9CY97 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.67■□□□□ 0.1
Ssu72Q9CY97 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ssu72Q9CY97 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ssu72Q9CY97 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ssu72Q9CY97 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Ssu72Q9CY97 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ssu72Q9CY97 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ssu72Q9CY97 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ssu72Q9CY97 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.67■□□□□ 0.1
Ssu72Q9CY97 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ssu72Q9CY97 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ssu72Q9CY97 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Ssu72Q9CY97 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ssu72Q9CY97 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ssu72Q9CY97 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ssu72Q9CY97 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.67■□□□□ 0.1
Ssu72Q9CY97 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ssu72Q9CY97 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ssu72Q9CY97 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Ssu72Q9CY97 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ssu72Q9CY97 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ssu72Q9CY97 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ssu72Q9CY97 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ssu72Q9CY97 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ssu72Q9CY97 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Ssu72Q9CY97 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ssu72Q9CY97 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Ssu72Q9CY97 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ssu72Q9CY97 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ssu72Q9CY97 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ssu72Q9CY97 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ssu72Q9CY97 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.66■□□□□ 0.1
Ssu72Q9CY97 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ssu72Q9CY97 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ssu72Q9CY97 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ssu72Q9CY97 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ssu72Q9CY97 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ssu72Q9CY97 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ssu72Q9CY97 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ssu72Q9CY97 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ssu72Q9CY97 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ssu72Q9CY97 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ssu72Q9CY97 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ssu72Q9CY97 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ssu72Q9CY97 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ssu72Q9CY97 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Ssu72Q9CY97 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ssu72Q9CY97 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ssu72Q9CY97 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Ssu72Q9CY97 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC15.65■□□□□ 0.1
Ssu72Q9CY97 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ssu72Q9CY97 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ssu72Q9CY97 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ssu72Q9CY97 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Ssu72Q9CY97 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ssu72Q9CY97 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.65■□□□□ 0.1
Ssu72Q9CY97 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ssu72Q9CY97 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Ssu72Q9CY97 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms