Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smc3Q9CW03 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Smc3Q9CW03 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smc3Q9CW03 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smc3Q9CW03 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Smc3Q9CW03 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Smc3Q9CW03 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Smc3Q9CW03 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smc3Q9CW03 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smc3Q9CW03 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smc3Q9CW03 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smc3Q9CW03 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smc3Q9CW03 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Smc3Q9CW03 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Smc3Q9CW03 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Smc3Q9CW03 Ptprs-211ENSMUST00000223859 5588 ntBASIC18.56■□□□□ 0.56
Smc3Q9CW03 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smc3Q9CW03 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Smc3Q9CW03 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smc3Q9CW03 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.56■□□□□ 0.56
Smc3Q9CW03 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Smc3Q9CW03 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Smc3Q9CW03 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smc3Q9CW03 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smc3Q9CW03 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Smc3Q9CW03 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smc3Q9CW03 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Smc3Q9CW03 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Smc3Q9CW03 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smc3Q9CW03 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Smc3Q9CW03 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smc3Q9CW03 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smc3Q9CW03 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smc3Q9CW03 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smc3Q9CW03 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smc3Q9CW03 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smc3Q9CW03 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smc3Q9CW03 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC18.55■□□□□ 0.56
Smc3Q9CW03 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smc3Q9CW03 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Smc3Q9CW03 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Smc3Q9CW03 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smc3Q9CW03 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smc3Q9CW03 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smc3Q9CW03 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smc3Q9CW03 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smc3Q9CW03 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smc3Q9CW03 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smc3Q9CW03 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.55■□□□□ 0.56
Smc3Q9CW03 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Smc3Q9CW03 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Smc3Q9CW03 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smc3Q9CW03 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smc3Q9CW03 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smc3Q9CW03 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Smc3Q9CW03 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smc3Q9CW03 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smc3Q9CW03 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC18.55■□□□□ 0.56
Smc3Q9CW03 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Smc3Q9CW03 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC18.55■□□□□ 0.56
Smc3Q9CW03 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smc3Q9CW03 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smc3Q9CW03 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Smc3Q9CW03 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Smc3Q9CW03 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smc3Q9CW03 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smc3Q9CW03 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC18.54■□□□□ 0.56
Smc3Q9CW03 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smc3Q9CW03 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Smc3Q9CW03 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smc3Q9CW03 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smc3Q9CW03 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.54■□□□□ 0.56
Smc3Q9CW03 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Smc3Q9CW03 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.54■□□□□ 0.56
Smc3Q9CW03 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.54■□□□□ 0.56
Smc3Q9CW03 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smc3Q9CW03 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Smc3Q9CW03 Gm9867-201ENSMUST00000192212 2647 ntBASIC18.54■□□□□ 0.56
Smc3Q9CW03 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Smc3Q9CW03 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smc3Q9CW03 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smc3Q9CW03 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smc3Q9CW03 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smc3Q9CW03 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smc3Q9CW03 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smc3Q9CW03 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc3Q9CW03 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Smc3Q9CW03 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc3Q9CW03 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc3Q9CW03 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc3Q9CW03 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc3Q9CW03 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc3Q9CW03 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc3Q9CW03 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc3Q9CW03 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc3Q9CW03 Gm10013-201ENSMUST00000106074 672 ntBASIC18.53■□□□□ 0.56
Smc3Q9CW03 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Smc3Q9CW03 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc3Q9CW03 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Smc3Q9CW03 Mir6404-201ENSMUST00000183699 94 ntBASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms