Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.87■□□□□ 0.13
Retreg3Q9CQV4 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Retreg3Q9CQV4 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retreg3Q9CQV4 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retreg3Q9CQV4 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Retreg3Q9CQV4 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
Retreg3Q9CQV4 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retreg3Q9CQV4 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Retreg3Q9CQV4 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Retreg3Q9CQV4 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.86■□□□□ 0.13
Retreg3Q9CQV4 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retreg3Q9CQV4 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Retreg3Q9CQV4 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.86■□□□□ 0.13
Retreg3Q9CQV4 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retreg3Q9CQV4 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retreg3Q9CQV4 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retreg3Q9CQV4 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.86■□□□□ 0.13
Retreg3Q9CQV4 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retreg3Q9CQV4 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Retreg3Q9CQV4 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC15.86■□□□□ 0.13
Retreg3Q9CQV4 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.86■□□□□ 0.13
Retreg3Q9CQV4 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retreg3Q9CQV4 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retreg3Q9CQV4 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retreg3Q9CQV4 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retreg3Q9CQV4 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retreg3Q9CQV4 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retreg3Q9CQV4 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.86■□□□□ 0.13
Retreg3Q9CQV4 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
Retreg3Q9CQV4 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retreg3Q9CQV4 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.86■□□□□ 0.13
Retreg3Q9CQV4 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Retreg3Q9CQV4 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Retreg3Q9CQV4 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retreg3Q9CQV4 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Retreg3Q9CQV4 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retreg3Q9CQV4 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retreg3Q9CQV4 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retreg3Q9CQV4 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retreg3Q9CQV4 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.85■□□□□ 0.13
Retreg3Q9CQV4 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retreg3Q9CQV4 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retreg3Q9CQV4 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Retreg3Q9CQV4 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retreg3Q9CQV4 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Retreg3Q9CQV4 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.85■□□□□ 0.13
Retreg3Q9CQV4 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.85■□□□□ 0.13
Retreg3Q9CQV4 Gm38230-201ENSMUST00000193572 1159 ntBASIC15.85■□□□□ 0.13
Retreg3Q9CQV4 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC15.85■□□□□ 0.13
Retreg3Q9CQV4 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.85■□□□□ 0.13
Retreg3Q9CQV4 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.85■□□□□ 0.13
Retreg3Q9CQV4 AC124408.1-201ENSMUST00000228938 707 ntBASIC15.85■□□□□ 0.13
Retreg3Q9CQV4 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retreg3Q9CQV4 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retreg3Q9CQV4 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Retreg3Q9CQV4 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Retreg3Q9CQV4 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Retreg3Q9CQV4 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retreg3Q9CQV4 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
Retreg3Q9CQV4 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retreg3Q9CQV4 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retreg3Q9CQV4 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retreg3Q9CQV4 Gm4459-201ENSMUST00000118750 468 ntBASIC15.84■□□□□ 0.13
Retreg3Q9CQV4 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retreg3Q9CQV4 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Retreg3Q9CQV4 Id2-201ENSMUST00000020974 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retreg3Q9CQV4 Gm9172-201ENSMUST00000212092 954 ntBASIC15.84■□□□□ 0.13
Retreg3Q9CQV4 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.84■□□□□ 0.13
Retreg3Q9CQV4 Gm18363-201ENSMUST00000221671 730 ntBASIC15.84■□□□□ 0.13
Retreg3Q9CQV4 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retreg3Q9CQV4 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Retreg3Q9CQV4 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retreg3Q9CQV4 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retreg3Q9CQV4 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC15.84■□□□□ 0.13
Retreg3Q9CQV4 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.84■□□□□ 0.13
Retreg3Q9CQV4 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Retreg3Q9CQV4 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retreg3Q9CQV4 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Retreg3Q9CQV4 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retreg3Q9CQV4 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Retreg3Q9CQV4 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Retreg3Q9CQV4 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Retreg3Q9CQV4 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
Retreg3Q9CQV4 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Retreg3Q9CQV4 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Retreg3Q9CQV4 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
Retreg3Q9CQV4 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Retreg3Q9CQV4 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Retreg3Q9CQV4 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retreg3Q9CQV4 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Retreg3Q9CQV4 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retreg3Q9CQV4 AC238940.1-201ENSMUST00000225106 1858 ntBASIC15.83■□□□□ 0.12
Retreg3Q9CQV4 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.83■□□□□ 0.12
Retreg3Q9CQV4 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.83■□□□□ 0.12
Retreg3Q9CQV4 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.83■□□□□ 0.12
Retreg3Q9CQV4 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.83■□□□□ 0.12
Retreg3Q9CQV4 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.83■□□□□ 0.12
Retreg3Q9CQV4 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.83■□□□□ 0.12
Retreg3Q9CQV4 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.83■□□□□ 0.12
Retreg3Q9CQV4 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms