Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ska1Q9CPV1 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ska1Q9CPV1 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ska1Q9CPV1 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ska1Q9CPV1 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Ska1Q9CPV1 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ska1Q9CPV1 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ska1Q9CPV1 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ska1Q9CPV1 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ska1Q9CPV1 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ska1Q9CPV1 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ska1Q9CPV1 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.92□□□□□ -0.02
Ska1Q9CPV1 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.92□□□□□ -0.02
Ska1Q9CPV1 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ska1Q9CPV1 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ska1Q9CPV1 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ska1Q9CPV1 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ska1Q9CPV1 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ska1Q9CPV1 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ska1Q9CPV1 Gm11336-201ENSMUST00000118168 334 ntBASIC14.91□□□□□ -0.02
Ska1Q9CPV1 Gm7889-201ENSMUST00000185591 958 ntBASIC14.91□□□□□ -0.02
Ska1Q9CPV1 Gm29707-201ENSMUST00000196325 491 ntBASIC14.91□□□□□ -0.02
Ska1Q9CPV1 Gm43799-201ENSMUST00000201845 579 ntBASIC14.91□□□□□ -0.02
Ska1Q9CPV1 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ska1Q9CPV1 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.91□□□□□ -0.02
Ska1Q9CPV1 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.91□□□□□ -0.02
Ska1Q9CPV1 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.91□□□□□ -0.02
Ska1Q9CPV1 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ska1Q9CPV1 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ska1Q9CPV1 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ska1Q9CPV1 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ska1Q9CPV1 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ska1Q9CPV1 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ska1Q9CPV1 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ska1Q9CPV1 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ska1Q9CPV1 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ska1Q9CPV1 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Ska1Q9CPV1 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ska1Q9CPV1 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Ska1Q9CPV1 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.9□□□□□ -0.02
Ska1Q9CPV1 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ska1Q9CPV1 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.9□□□□□ -0.02
Ska1Q9CPV1 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ska1Q9CPV1 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ska1Q9CPV1 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Ska1Q9CPV1 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.9□□□□□ -0.02
Ska1Q9CPV1 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ska1Q9CPV1 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ska1Q9CPV1 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ska1Q9CPV1 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ska1Q9CPV1 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ska1Q9CPV1 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ska1Q9CPV1 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ska1Q9CPV1 Gm26039-201ENSMUST00000158152 144 ntBASIC14.9□□□□□ -0.02
Ska1Q9CPV1 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Ska1Q9CPV1 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Ska1Q9CPV1 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ska1Q9CPV1 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.9□□□□□ -0.02
Ska1Q9CPV1 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ska1Q9CPV1 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ska1Q9CPV1 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC14.9□□□□□ -0.02
Ska1Q9CPV1 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.9□□□□□ -0.02
Ska1Q9CPV1 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ska1Q9CPV1 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ska1Q9CPV1 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ska1Q9CPV1 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ska1Q9CPV1 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ska1Q9CPV1 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ska1Q9CPV1 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ska1Q9CPV1 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.9□□□□□ -0.02
Ska1Q9CPV1 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Ska1Q9CPV1 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ska1Q9CPV1 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ska1Q9CPV1 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ska1Q9CPV1 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ska1Q9CPV1 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ska1Q9CPV1 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ska1Q9CPV1 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.89□□□□□ -0.03
Ska1Q9CPV1 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ska1Q9CPV1 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ska1Q9CPV1 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ska1Q9CPV1 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ska1Q9CPV1 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ska1Q9CPV1 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Ska1Q9CPV1 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ska1Q9CPV1 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ska1Q9CPV1 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ska1Q9CPV1 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.89□□□□□ -0.03
Ska1Q9CPV1 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.89□□□□□ -0.03
Ska1Q9CPV1 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ska1Q9CPV1 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ska1Q9CPV1 Gm27389-201ENSMUST00000183622 195 ntBASIC14.89□□□□□ -0.03
Ska1Q9CPV1 Gm18421-201ENSMUST00000204122 625 ntBASIC14.89□□□□□ -0.03
Ska1Q9CPV1 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.89□□□□□ -0.03
Ska1Q9CPV1 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.89□□□□□ -0.03
Ska1Q9CPV1 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.89□□□□□ -0.03
Ska1Q9CPV1 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ska1Q9CPV1 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ska1Q9CPV1 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Ska1Q9CPV1 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms