Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rtn4Q99P72 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rtn4Q99P72 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rtn4Q99P72 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rtn4Q99P72 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rtn4Q99P72 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rtn4Q99P72 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rtn4Q99P72 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rtn4Q99P72 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rtn4Q99P72 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
Rtn4Q99P72 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rtn4Q99P72 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Rtn4Q99P72 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rtn4Q99P72 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rtn4Q99P72 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rtn4Q99P72 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
Rtn4Q99P72 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rtn4Q99P72 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rtn4Q99P72 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rtn4Q99P72 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rtn4Q99P72 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rtn4Q99P72 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
Rtn4Q99P72 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rtn4Q99P72 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rtn4Q99P72 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC20.14■□□□□ 0.81
Rtn4Q99P72 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Rtn4Q99P72 AC154757.2-201ENSMUST00000228885 743 ntBASIC20.14■□□□□ 0.81
Rtn4Q99P72 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rtn4Q99P72 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Rtn4Q99P72 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rtn4Q99P72 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rtn4Q99P72 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rtn4Q99P72 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rtn4Q99P72 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Rtn4Q99P72 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rtn4Q99P72 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtn4Q99P72 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtn4Q99P72 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtn4Q99P72 Gm9889-202ENSMUST00000206983 1577 ntBASIC20.13■□□□□ 0.81
Rtn4Q99P72 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtn4Q99P72 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtn4Q99P72 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtn4Q99P72 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC20.13■□□□□ 0.81
Rtn4Q99P72 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtn4Q99P72 Gm14201-201ENSMUST00000117627 289 ntBASIC20.13■□□□□ 0.81
Rtn4Q99P72 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtn4Q99P72 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtn4Q99P72 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC20.13■□□□□ 0.81
Rtn4Q99P72 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC20.13■□□□□ 0.81
Rtn4Q99P72 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rtn4Q99P72 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtn4Q99P72 AC107711.5-202ENSMUST00000226429 702 ntBASIC20.13■□□□□ 0.81
Rtn4Q99P72 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Rtn4Q99P72 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Rtn4Q99P72 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtn4Q99P72 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtn4Q99P72 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtn4Q99P72 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rtn4Q99P72 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtn4Q99P72 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtn4Q99P72 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rtn4Q99P72 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtn4Q99P72 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtn4Q99P72 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtn4Q99P72 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtn4Q99P72 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Rtn4Q99P72 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtn4Q99P72 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtn4Q99P72 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rtn4Q99P72 Gm25745-201ENSMUST00000174945 133 ntBASIC20.12■□□□□ 0.81
Rtn4Q99P72 Gm45696-201ENSMUST00000212088 985 ntBASIC20.12■□□□□ 0.81
Rtn4Q99P72 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC20.12■□□□□ 0.81
Rtn4Q99P72 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtn4Q99P72 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC20.12■□□□□ 0.81
Rtn4Q99P72 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtn4Q99P72 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtn4Q99P72 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtn4Q99P72 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtn4Q99P72 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtn4Q99P72 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rtn4Q99P72 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rtn4Q99P72 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC20.11■□□□□ 0.81
Rtn4Q99P72 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rtn4Q99P72 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Rtn4Q99P72 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rtn4Q99P72 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rtn4Q99P72 Gm14126-201ENSMUST00000122345 395 ntBASIC20.11■□□□□ 0.81
Rtn4Q99P72 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Rtn4Q99P72 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC20.11■□□□□ 0.81
Rtn4Q99P72 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC20.11■□□□□ 0.81
Rtn4Q99P72 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Rtn4Q99P72 Gm43514-201ENSMUST00000198852 424 ntBASIC20.11■□□□□ 0.81
Rtn4Q99P72 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC20.11■□□□□ 0.81
Rtn4Q99P72 Gm18195-201ENSMUST00000207604 706 ntBASIC20.11■□□□□ 0.81
Rtn4Q99P72 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC20.11■□□□□ 0.81
Rtn4Q99P72 Gm6296-201ENSMUST00000222599 943 ntBASIC20.11■□□□□ 0.81
Rtn4Q99P72 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC20.11■□□□□ 0.81
Rtn4Q99P72 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rtn4Q99P72 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Rtn4Q99P72 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms