Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scrt1Q99M85 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scrt1Q99M85 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scrt1Q99M85 Gm36858-201ENSMUST00000194501 2391 ntBASIC13.82□□□□□ -0.2
Scrt1Q99M85 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scrt1Q99M85 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scrt1Q99M85 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scrt1Q99M85 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Scrt1Q99M85 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scrt1Q99M85 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scrt1Q99M85 AL590614.2-201ENSMUST00000225374 1937 ntBASIC13.82□□□□□ -0.2
Scrt1Q99M85 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scrt1Q99M85 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.82□□□□□ -0.2
Scrt1Q99M85 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scrt1Q99M85 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Scrt1Q99M85 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.81□□□□□ -0.2
Scrt1Q99M85 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Scrt1Q99M85 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scrt1Q99M85 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Scrt1Q99M85 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
Scrt1Q99M85 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.81□□□□□ -0.2
Scrt1Q99M85 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Scrt1Q99M85 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Scrt1Q99M85 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scrt1Q99M85 Gm14057-201ENSMUST00000120631 482 ntBASIC13.81□□□□□ -0.2
Scrt1Q99M85 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Scrt1Q99M85 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Scrt1Q99M85 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.81□□□□□ -0.2
Scrt1Q99M85 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.81□□□□□ -0.2
Scrt1Q99M85 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.81□□□□□ -0.2
Scrt1Q99M85 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scrt1Q99M85 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.81□□□□□ -0.2
Scrt1Q99M85 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scrt1Q99M85 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scrt1Q99M85 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scrt1Q99M85 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.81□□□□□ -0.2
Scrt1Q99M85 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scrt1Q99M85 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Scrt1Q99M85 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scrt1Q99M85 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Scrt1Q99M85 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Scrt1Q99M85 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scrt1Q99M85 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.81□□□□□ -0.2
Scrt1Q99M85 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Scrt1Q99M85 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scrt1Q99M85 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scrt1Q99M85 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Scrt1Q99M85 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scrt1Q99M85 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scrt1Q99M85 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Scrt1Q99M85 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scrt1Q99M85 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scrt1Q99M85 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scrt1Q99M85 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.8□□□□□ -0.2
Scrt1Q99M85 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scrt1Q99M85 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scrt1Q99M85 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Scrt1Q99M85 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Scrt1Q99M85 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.8□□□□□ -0.2
Scrt1Q99M85 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scrt1Q99M85 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scrt1Q99M85 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Scrt1Q99M85 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scrt1Q99M85 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scrt1Q99M85 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scrt1Q99M85 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Scrt1Q99M85 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.8□□□□□ -0.2
Scrt1Q99M85 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scrt1Q99M85 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scrt1Q99M85 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Scrt1Q99M85 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Scrt1Q99M85 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Scrt1Q99M85 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scrt1Q99M85 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scrt1Q99M85 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Scrt1Q99M85 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scrt1Q99M85 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scrt1Q99M85 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scrt1Q99M85 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Scrt1Q99M85 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Scrt1Q99M85 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scrt1Q99M85 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scrt1Q99M85 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scrt1Q99M85 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.79□□□□□ -0.2
Scrt1Q99M85 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.79□□□□□ -0.2
Scrt1Q99M85 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scrt1Q99M85 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scrt1Q99M85 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scrt1Q99M85 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scrt1Q99M85 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
Scrt1Q99M85 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.79□□□□□ -0.2
Scrt1Q99M85 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.79□□□□□ -0.2
Scrt1Q99M85 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scrt1Q99M85 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scrt1Q99M85 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scrt1Q99M85 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC13.79□□□□□ -0.2
Scrt1Q99M85 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scrt1Q99M85 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC13.79□□□□□ -0.2
Scrt1Q99M85 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Scrt1Q99M85 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms