Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp1b1Q99LU0 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp1b1Q99LU0 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp1b1Q99LU0 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Chmp1b1Q99LU0 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.94□□□□□ -0.02
Chmp1b1Q99LU0 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp1b1Q99LU0 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
Chmp1b1Q99LU0 Gm29518-201ENSMUST00000190858 372 ntBASIC14.94□□□□□ -0.02
Chmp1b1Q99LU0 Gm36967-201ENSMUST00000193814 266 ntBASIC14.94□□□□□ -0.02
Chmp1b1Q99LU0 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp1b1Q99LU0 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp1b1Q99LU0 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp1b1Q99LU0 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.94□□□□□ -0.02
Chmp1b1Q99LU0 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Chmp1b1Q99LU0 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp1b1Q99LU0 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp1b1Q99LU0 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp1b1Q99LU0 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp1b1Q99LU0 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Chmp1b1Q99LU0 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Chmp1b1Q99LU0 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.94□□□□□ -0.02
Chmp1b1Q99LU0 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp1b1Q99LU0 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp1b1Q99LU0 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp1b1Q99LU0 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chmp1b1Q99LU0 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp1b1Q99LU0 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp1b1Q99LU0 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp1b1Q99LU0 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp1b1Q99LU0 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp1b1Q99LU0 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp1b1Q99LU0 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.93□□□□□ -0.02
Chmp1b1Q99LU0 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp1b1Q99LU0 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp1b1Q99LU0 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp1b1Q99LU0 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp1b1Q99LU0 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp1b1Q99LU0 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp1b1Q99LU0 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp1b1Q99LU0 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp1b1Q99LU0 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.93□□□□□ -0.02
Chmp1b1Q99LU0 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp1b1Q99LU0 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp1b1Q99LU0 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp1b1Q99LU0 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp1b1Q99LU0 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp1b1Q99LU0 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp1b1Q99LU0 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
Chmp1b1Q99LU0 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.93□□□□□ -0.02
Chmp1b1Q99LU0 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp1b1Q99LU0 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp1b1Q99LU0 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.93□□□□□ -0.02
Chmp1b1Q99LU0 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp1b1Q99LU0 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp1b1Q99LU0 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chmp1b1Q99LU0 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp1b1Q99LU0 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp1b1Q99LU0 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp1b1Q99LU0 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp1b1Q99LU0 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
Chmp1b1Q99LU0 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp1b1Q99LU0 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp1b1Q99LU0 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp1b1Q99LU0 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Chmp1b1Q99LU0 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp1b1Q99LU0 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp1b1Q99LU0 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Chmp1b1Q99LU0 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp1b1Q99LU0 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp1b1Q99LU0 Gm44430-201ENSMUST00000203376 995 ntBASIC14.92□□□□□ -0.02
Chmp1b1Q99LU0 Gm45328-201ENSMUST00000210942 917 ntBASIC14.92□□□□□ -0.02
Chmp1b1Q99LU0 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp1b1Q99LU0 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp1b1Q99LU0 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Chmp1b1Q99LU0 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp1b1Q99LU0 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp1b1Q99LU0 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.92□□□□□ -0.02
Chmp1b1Q99LU0 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp1b1Q99LU0 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp1b1Q99LU0 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Chmp1b1Q99LU0 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp1b1Q99LU0 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Chmp1b1Q99LU0 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp1b1Q99LU0 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp1b1Q99LU0 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.92□□□□□ -0.02
Chmp1b1Q99LU0 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Chmp1b1Q99LU0 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp1b1Q99LU0 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp1b1Q99LU0 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp1b1Q99LU0 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp1b1Q99LU0 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp1b1Q99LU0 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp1b1Q99LU0 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp1b1Q99LU0 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Chmp1b1Q99LU0 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp1b1Q99LU0 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.91□□□□□ -0.02
Chmp1b1Q99LU0 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp1b1Q99LU0 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Chmp1b1Q99LU0 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chmp1b1Q99LU0 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms