Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Gm24932-201ENSMUST00000103763 110 ntBASIC19.42■□□□□ 0.7
RtcbQ99LF4 Gm24115-201ENSMUST00000103799 110 ntBASIC19.42■□□□□ 0.7
RtcbQ99LF4 Gm22190-201ENSMUST00000103827 110 ntBASIC19.42■□□□□ 0.7
RtcbQ99LF4 Gm22191-201ENSMUST00000103831 110 ntBASIC19.42■□□□□ 0.7
RtcbQ99LF4 Gm24721-201ENSMUST00000103849 110 ntBASIC19.42■□□□□ 0.7
RtcbQ99LF4 Gm28018-201ENSMUST00000103869 110 ntBASIC19.42■□□□□ 0.7
RtcbQ99LF4 Gm26399-201ENSMUST00000103937 110 ntBASIC19.42■□□□□ 0.7
RtcbQ99LF4 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RtcbQ99LF4 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC19.42■□□□□ 0.7
RtcbQ99LF4 Gm25349-201ENSMUST00000177728 110 ntBASIC19.42■□□□□ 0.7
RtcbQ99LF4 Gm23616-201ENSMUST00000177797 110 ntBASIC19.42■□□□□ 0.7
RtcbQ99LF4 Gm25871-201ENSMUST00000177816 110 ntBASIC19.42■□□□□ 0.7
RtcbQ99LF4 Gm24752-201ENSMUST00000178240 110 ntBASIC19.42■□□□□ 0.7
RtcbQ99LF4 Gm24496-201ENSMUST00000178287 110 ntBASIC19.42■□□□□ 0.7
RtcbQ99LF4 Gm25649-201ENSMUST00000178476 110 ntBASIC19.42■□□□□ 0.7
RtcbQ99LF4 Gm25548-201ENSMUST00000178681 110 ntBASIC19.42■□□□□ 0.7
RtcbQ99LF4 Gm23147-201ENSMUST00000178841 110 ntBASIC19.42■□□□□ 0.7
RtcbQ99LF4 Gm26095-201ENSMUST00000179270 110 ntBASIC19.42■□□□□ 0.7
RtcbQ99LF4 Gm22171-201ENSMUST00000179283 110 ntBASIC19.42■□□□□ 0.7
RtcbQ99LF4 Gm23936-201ENSMUST00000179354 110 ntBASIC19.42■□□□□ 0.7
RtcbQ99LF4 Gm22619-201ENSMUST00000179516 110 ntBASIC19.42■□□□□ 0.7
RtcbQ99LF4 Gm25255-201ENSMUST00000179579 110 ntBASIC19.42■□□□□ 0.7
RtcbQ99LF4 Gm24755-201ENSMUST00000179691 110 ntBASIC19.42■□□□□ 0.7
RtcbQ99LF4 Gm26506-201ENSMUST00000179692 110 ntBASIC19.42■□□□□ 0.7
RtcbQ99LF4 Gm25086-201ENSMUST00000179931 110 ntBASIC19.42■□□□□ 0.7
RtcbQ99LF4 Gm23243-201ENSMUST00000180047 110 ntBASIC19.42■□□□□ 0.7
RtcbQ99LF4 Gm24659-201ENSMUST00000180212 110 ntBASIC19.42■□□□□ 0.7
RtcbQ99LF4 Gm24169-201ENSMUST00000180244 110 ntBASIC19.42■□□□□ 0.7
RtcbQ99LF4 Gm23689-201ENSMUST00000180354 110 ntBASIC19.42■□□□□ 0.7
RtcbQ99LF4 Gm27359-201ENSMUST00000184153 110 ntBASIC19.42■□□□□ 0.7
RtcbQ99LF4 Gm27785-201ENSMUST00000184268 110 ntBASIC19.42■□□□□ 0.7
RtcbQ99LF4 Gm27466-201ENSMUST00000184396 110 ntBASIC19.42■□□□□ 0.7
RtcbQ99LF4 Gm27703-201ENSMUST00000184836 110 ntBASIC19.42■□□□□ 0.7
RtcbQ99LF4 Gm10253-201ENSMUST00000194270 940 ntBASIC19.42■□□□□ 0.7
RtcbQ99LF4 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC19.42■□□□□ 0.7
RtcbQ99LF4 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC19.42■□□□□ 0.7
RtcbQ99LF4 AC126408.1-201ENSMUST00000225184 523 ntBASIC19.42■□□□□ 0.7
RtcbQ99LF4 Arhgef33-209ENSMUST00000225223 714 ntBASIC19.42■□□□□ 0.7
RtcbQ99LF4 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
RtcbQ99LF4 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RtcbQ99LF4 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RtcbQ99LF4 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RtcbQ99LF4 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RtcbQ99LF4 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RtcbQ99LF4 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RtcbQ99LF4 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
RtcbQ99LF4 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
RtcbQ99LF4 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RtcbQ99LF4 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RtcbQ99LF4 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RtcbQ99LF4 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC19.41■□□□□ 0.7
RtcbQ99LF4 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RtcbQ99LF4 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC19.41■□□□□ 0.7
RtcbQ99LF4 Gm11453-201ENSMUST00000117318 1007 ntBASIC19.41■□□□□ 0.7
RtcbQ99LF4 Gm5745-201ENSMUST00000183748 313 ntBASIC19.41■□□□□ 0.7
RtcbQ99LF4 Gm18057-201ENSMUST00000208220 503 ntBASIC19.41■□□□□ 0.7
RtcbQ99LF4 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RtcbQ99LF4 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RtcbQ99LF4 Gm5184-201ENSMUST00000220417 1702 ntBASIC19.41■□□□□ 0.7
RtcbQ99LF4 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RtcbQ99LF4 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RtcbQ99LF4 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RtcbQ99LF4 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
RtcbQ99LF4 AC157650.3-201ENSMUST00000225058 1476 ntBASIC19.41■□□□□ 0.7
RtcbQ99LF4 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RtcbQ99LF4 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RtcbQ99LF4 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RtcbQ99LF4 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC19.4■□□□□ 0.7
RtcbQ99LF4 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RtcbQ99LF4 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RtcbQ99LF4 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RtcbQ99LF4 Gm16198-201ENSMUST00000118766 670 ntBASIC19.4■□□□□ 0.7
RtcbQ99LF4 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC19.4■□□□□ 0.7
RtcbQ99LF4 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC19.4■□□□□ 0.7
RtcbQ99LF4 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RtcbQ99LF4 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RtcbQ99LF4 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
RtcbQ99LF4 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RtcbQ99LF4 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RtcbQ99LF4 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RtcbQ99LF4 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RtcbQ99LF4 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RtcbQ99LF4 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RtcbQ99LF4 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RtcbQ99LF4 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RtcbQ99LF4 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
RtcbQ99LF4 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
RtcbQ99LF4 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
RtcbQ99LF4 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RtcbQ99LF4 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.39■□□□□ 0.7
RtcbQ99LF4 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RtcbQ99LF4 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RtcbQ99LF4 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.39■□□□□ 0.69
RtcbQ99LF4 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RtcbQ99LF4 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RtcbQ99LF4 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
RtcbQ99LF4 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RtcbQ99LF4 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
RtcbQ99LF4 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RtcbQ99LF4 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms