Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab40bQ8VHP8 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab40bQ8VHP8 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab40bQ8VHP8 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab40bQ8VHP8 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab40bQ8VHP8 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Rab40bQ8VHP8 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab40bQ8VHP8 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab40bQ8VHP8 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab40bQ8VHP8 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rab40bQ8VHP8 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab40bQ8VHP8 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC14.22□□□□□ -0.13
Rab40bQ8VHP8 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC14.22□□□□□ -0.13
Rab40bQ8VHP8 Gm16061-201ENSMUST00000122167 857 ntBASIC14.22□□□□□ -0.13
Rab40bQ8VHP8 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.22□□□□□ -0.13
Rab40bQ8VHP8 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.22□□□□□ -0.13
Rab40bQ8VHP8 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.22□□□□□ -0.13
Rab40bQ8VHP8 Gm20760-201ENSMUST00000179197 648 ntBASIC14.22□□□□□ -0.13
Rab40bQ8VHP8 Gm29994-201ENSMUST00000195495 1193 ntBASIC14.22□□□□□ -0.13
Rab40bQ8VHP8 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab40bQ8VHP8 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.22□□□□□ -0.13
Rab40bQ8VHP8 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Rab40bQ8VHP8 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab40bQ8VHP8 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Rab40bQ8VHP8 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab40bQ8VHP8 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rab40bQ8VHP8 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Rab40bQ8VHP8 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rab40bQ8VHP8 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab40bQ8VHP8 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab40bQ8VHP8 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab40bQ8VHP8 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rab40bQ8VHP8 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rab40bQ8VHP8 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.22□□□□□ -0.13
Rab40bQ8VHP8 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rab40bQ8VHP8 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rab40bQ8VHP8 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rab40bQ8VHP8 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rab40bQ8VHP8 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Rab40bQ8VHP8 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.21□□□□□ -0.13
Rab40bQ8VHP8 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rab40bQ8VHP8 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Rab40bQ8VHP8 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Rab40bQ8VHP8 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.21□□□□□ -0.13
Rab40bQ8VHP8 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rab40bQ8VHP8 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rab40bQ8VHP8 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rab40bQ8VHP8 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.21□□□□□ -0.13
Rab40bQ8VHP8 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rab40bQ8VHP8 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.21□□□□□ -0.13
Rab40bQ8VHP8 Gm7213-201ENSMUST00000215977 950 ntBASIC14.21□□□□□ -0.13
Rab40bQ8VHP8 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Rab40bQ8VHP8 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rab40bQ8VHP8 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rab40bQ8VHP8 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Rab40bQ8VHP8 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rab40bQ8VHP8 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rab40bQ8VHP8 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Rab40bQ8VHP8 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.21□□□□□ -0.14
Rab40bQ8VHP8 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rab40bQ8VHP8 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Rab40bQ8VHP8 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Rab40bQ8VHP8 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Rab40bQ8VHP8 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab40bQ8VHP8 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Rab40bQ8VHP8 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab40bQ8VHP8 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rab40bQ8VHP8 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.2□□□□□ -0.14
Rab40bQ8VHP8 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Rab40bQ8VHP8 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab40bQ8VHP8 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.2□□□□□ -0.14
Rab40bQ8VHP8 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.2□□□□□ -0.14
Rab40bQ8VHP8 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC14.2□□□□□ -0.14
Rab40bQ8VHP8 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab40bQ8VHP8 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab40bQ8VHP8 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab40bQ8VHP8 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab40bQ8VHP8 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rab40bQ8VHP8 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab40bQ8VHP8 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab40bQ8VHP8 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Rab40bQ8VHP8 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rab40bQ8VHP8 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Rab40bQ8VHP8 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Rab40bQ8VHP8 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rab40bQ8VHP8 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab40bQ8VHP8 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Rab40bQ8VHP8 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab40bQ8VHP8 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab40bQ8VHP8 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Rab40bQ8VHP8 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rab40bQ8VHP8 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
Rab40bQ8VHP8 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rab40bQ8VHP8 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab40bQ8VHP8 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab40bQ8VHP8 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Rab40bQ8VHP8 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Rab40bQ8VHP8 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rab40bQ8VHP8 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Rab40bQ8VHP8 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms