Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lmcd1Q8VEE1 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lmcd1Q8VEE1 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lmcd1Q8VEE1 Gm15693-201ENSMUST00000120470 637 ntBASIC16.77■□□□□ 0.28
Lmcd1Q8VEE1 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC16.77■□□□□ 0.28
Lmcd1Q8VEE1 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Lmcd1Q8VEE1 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Lmcd1Q8VEE1 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Lmcd1Q8VEE1 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC16.77■□□□□ 0.28
Lmcd1Q8VEE1 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC16.77■□□□□ 0.28
Lmcd1Q8VEE1 Gm2423-201ENSMUST00000074863 733 ntBASIC16.77■□□□□ 0.28
Lmcd1Q8VEE1 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Lmcd1Q8VEE1 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Lmcd1Q8VEE1 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
Lmcd1Q8VEE1 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
Lmcd1Q8VEE1 Gm13410-201ENSMUST00000117058 1415 ntBASIC16.77■□□□□ 0.27
Lmcd1Q8VEE1 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Lmcd1Q8VEE1 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Lmcd1Q8VEE1 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lmcd1Q8VEE1 Gm6018-201ENSMUST00000216090 1306 ntBASIC16.76■□□□□ 0.27
Lmcd1Q8VEE1 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lmcd1Q8VEE1 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lmcd1Q8VEE1 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lmcd1Q8VEE1 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lmcd1Q8VEE1 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.76■□□□□ 0.27
Lmcd1Q8VEE1 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lmcd1Q8VEE1 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC16.76■□□□□ 0.27
Lmcd1Q8VEE1 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC16.76■□□□□ 0.27
Lmcd1Q8VEE1 Mir7684-201ENSMUST00000183858 60 ntBASIC16.76■□□□□ 0.27
Lmcd1Q8VEE1 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Lmcd1Q8VEE1 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lmcd1Q8VEE1 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lmcd1Q8VEE1 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lmcd1Q8VEE1 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lmcd1Q8VEE1 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lmcd1Q8VEE1 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lmcd1Q8VEE1 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.76■□□□□ 0.27
Lmcd1Q8VEE1 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lmcd1Q8VEE1 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Lmcd1Q8VEE1 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lmcd1Q8VEE1 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lmcd1Q8VEE1 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lmcd1Q8VEE1 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lmcd1Q8VEE1 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Lmcd1Q8VEE1 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.76■□□□□ 0.27
Lmcd1Q8VEE1 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Lmcd1Q8VEE1 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lmcd1Q8VEE1 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.75■□□□□ 0.27
Lmcd1Q8VEE1 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lmcd1Q8VEE1 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lmcd1Q8VEE1 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lmcd1Q8VEE1 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lmcd1Q8VEE1 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lmcd1Q8VEE1 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lmcd1Q8VEE1 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Lmcd1Q8VEE1 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lmcd1Q8VEE1 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Lmcd1Q8VEE1 Gm13223-201ENSMUST00000118609 747 ntBASIC16.75■□□□□ 0.27
Lmcd1Q8VEE1 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lmcd1Q8VEE1 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC16.75■□□□□ 0.27
Lmcd1Q8VEE1 Gm8969-201ENSMUST00000199694 526 ntBASIC16.75■□□□□ 0.27
Lmcd1Q8VEE1 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC16.75■□□□□ 0.27
Lmcd1Q8VEE1 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Lmcd1Q8VEE1 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lmcd1Q8VEE1 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC16.75■□□□□ 0.27
Lmcd1Q8VEE1 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lmcd1Q8VEE1 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lmcd1Q8VEE1 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lmcd1Q8VEE1 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lmcd1Q8VEE1 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Lmcd1Q8VEE1 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.74■□□□□ 0.27
Lmcd1Q8VEE1 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Lmcd1Q8VEE1 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Lmcd1Q8VEE1 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lmcd1Q8VEE1 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lmcd1Q8VEE1 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lmcd1Q8VEE1 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lmcd1Q8VEE1 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC16.74■□□□□ 0.27
Lmcd1Q8VEE1 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Lmcd1Q8VEE1 Gm12017-201ENSMUST00000122453 1003 ntBASIC16.74■□□□□ 0.27
Lmcd1Q8VEE1 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC16.74■□□□□ 0.27
Lmcd1Q8VEE1 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lmcd1Q8VEE1 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Lmcd1Q8VEE1 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC16.74■□□□□ 0.27
Lmcd1Q8VEE1 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Lmcd1Q8VEE1 Gm18187-201ENSMUST00000196476 984 ntBASIC16.74■□□□□ 0.27
Lmcd1Q8VEE1 Gm5779-201ENSMUST00000218467 910 ntBASIC16.74■□□□□ 0.27
Lmcd1Q8VEE1 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC16.74■□□□□ 0.27
Lmcd1Q8VEE1 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lmcd1Q8VEE1 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lmcd1Q8VEE1 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lmcd1Q8VEE1 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lmcd1Q8VEE1 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Lmcd1Q8VEE1 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.74■□□□□ 0.27
Lmcd1Q8VEE1 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lmcd1Q8VEE1 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Lmcd1Q8VEE1 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lmcd1Q8VEE1 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Lmcd1Q8VEE1 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Lmcd1Q8VEE1 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms