Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkd2Q8VE28 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkd2Q8VE28 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nkd2Q8VE28 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkd2Q8VE28 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkd2Q8VE28 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkd2Q8VE28 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkd2Q8VE28 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.4□□□□□ -0.1
Nkd2Q8VE28 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.4□□□□□ -0.1
Nkd2Q8VE28 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.4□□□□□ -0.1
Nkd2Q8VE28 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.4□□□□□ -0.1
Nkd2Q8VE28 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Nkd2Q8VE28 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkd2Q8VE28 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkd2Q8VE28 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkd2Q8VE28 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkd2Q8VE28 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkd2Q8VE28 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkd2Q8VE28 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkd2Q8VE28 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkd2Q8VE28 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkd2Q8VE28 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nkd2Q8VE28 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkd2Q8VE28 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkd2Q8VE28 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nkd2Q8VE28 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkd2Q8VE28 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.39□□□□□ -0.11
Nkd2Q8VE28 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkd2Q8VE28 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkd2Q8VE28 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nkd2Q8VE28 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkd2Q8VE28 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkd2Q8VE28 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkd2Q8VE28 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Nkd2Q8VE28 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC14.39□□□□□ -0.11
Nkd2Q8VE28 Gm13312-201ENSMUST00000119631 718 ntBASIC14.39□□□□□ -0.11
Nkd2Q8VE28 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nkd2Q8VE28 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nkd2Q8VE28 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nkd2Q8VE28 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nkd2Q8VE28 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.39□□□□□ -0.11
Nkd2Q8VE28 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.39□□□□□ -0.11
Nkd2Q8VE28 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.39□□□□□ -0.11
Nkd2Q8VE28 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkd2Q8VE28 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.39□□□□□ -0.11
Nkd2Q8VE28 Rps4l-201ENSMUST00000071745 943 ntBASIC14.39□□□□□ -0.11
Nkd2Q8VE28 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkd2Q8VE28 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkd2Q8VE28 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkd2Q8VE28 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkd2Q8VE28 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Nkd2Q8VE28 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
Nkd2Q8VE28 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkd2Q8VE28 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nkd2Q8VE28 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Nkd2Q8VE28 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nkd2Q8VE28 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nkd2Q8VE28 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.38□□□□□ -0.11
Nkd2Q8VE28 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nkd2Q8VE28 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkd2Q8VE28 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkd2Q8VE28 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkd2Q8VE28 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkd2Q8VE28 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC14.38□□□□□ -0.11
Nkd2Q8VE28 Gm12644-201ENSMUST00000119935 606 ntBASIC14.38□□□□□ -0.11
Nkd2Q8VE28 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nkd2Q8VE28 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.38□□□□□ -0.11
Nkd2Q8VE28 Gm44450-201ENSMUST00000199528 114 ntBASIC14.38□□□□□ -0.11
Nkd2Q8VE28 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.38□□□□□ -0.11
Nkd2Q8VE28 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Nkd2Q8VE28 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkd2Q8VE28 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.38□□□□□ -0.11
Nkd2Q8VE28 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.38□□□□□ -0.11
Nkd2Q8VE28 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkd2Q8VE28 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nkd2Q8VE28 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkd2Q8VE28 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Nkd2Q8VE28 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Nkd2Q8VE28 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Nkd2Q8VE28 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkd2Q8VE28 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.38□□□□□ -0.11
Nkd2Q8VE28 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkd2Q8VE28 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nkd2Q8VE28 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkd2Q8VE28 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkd2Q8VE28 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nkd2Q8VE28 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Nkd2Q8VE28 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nkd2Q8VE28 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.37□□□□□ -0.11
Nkd2Q8VE28 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nkd2Q8VE28 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.37□□□□□ -0.11
Nkd2Q8VE28 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nkd2Q8VE28 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.37□□□□□ -0.11
Nkd2Q8VE28 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkd2Q8VE28 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkd2Q8VE28 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC14.37□□□□□ -0.11
Nkd2Q8VE28 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nkd2Q8VE28 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nkd2Q8VE28 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nkd2Q8VE28 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms