Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx39aQ8VDW0 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx39aQ8VDW0 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx39aQ8VDW0 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx39aQ8VDW0 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx39aQ8VDW0 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Ddx39aQ8VDW0 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx39aQ8VDW0 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.5■□□□□ 0.39
Ddx39aQ8VDW0 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx39aQ8VDW0 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx39aQ8VDW0 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.5■□□□□ 0.39
Ddx39aQ8VDW0 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ddx39aQ8VDW0 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Ddx39aQ8VDW0 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx39aQ8VDW0 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx39aQ8VDW0 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx39aQ8VDW0 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx39aQ8VDW0 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx39aQ8VDW0 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx39aQ8VDW0 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx39aQ8VDW0 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx39aQ8VDW0 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx39aQ8VDW0 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Ddx39aQ8VDW0 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx39aQ8VDW0 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx39aQ8VDW0 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Ddx39aQ8VDW0 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx39aQ8VDW0 Gm14494-201ENSMUST00000118786 435 ntBASIC17.49■□□□□ 0.39
Ddx39aQ8VDW0 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.49■□□□□ 0.39
Ddx39aQ8VDW0 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.49■□□□□ 0.39
Ddx39aQ8VDW0 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx39aQ8VDW0 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.49■□□□□ 0.39
Ddx39aQ8VDW0 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.49■□□□□ 0.39
Ddx39aQ8VDW0 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx39aQ8VDW0 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Ddx39aQ8VDW0 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx39aQ8VDW0 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx39aQ8VDW0 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx39aQ8VDW0 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.49■□□□□ 0.39
Ddx39aQ8VDW0 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Ddx39aQ8VDW0 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.48■□□□□ 0.39
Ddx39aQ8VDW0 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx39aQ8VDW0 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Ddx39aQ8VDW0 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx39aQ8VDW0 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx39aQ8VDW0 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx39aQ8VDW0 Gm2308-201ENSMUST00000166539 1004 ntBASIC17.48■□□□□ 0.39
Ddx39aQ8VDW0 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.48■□□□□ 0.39
Ddx39aQ8VDW0 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx39aQ8VDW0 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC17.48■□□□□ 0.39
Ddx39aQ8VDW0 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.48■□□□□ 0.39
Ddx39aQ8VDW0 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.48■□□□□ 0.39
Ddx39aQ8VDW0 Gm45167-201ENSMUST00000208007 322 ntBASIC17.48■□□□□ 0.39
Ddx39aQ8VDW0 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx39aQ8VDW0 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx39aQ8VDW0 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx39aQ8VDW0 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx39aQ8VDW0 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Ddx39aQ8VDW0 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Ddx39aQ8VDW0 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Ddx39aQ8VDW0 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx39aQ8VDW0 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx39aQ8VDW0 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx39aQ8VDW0 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx39aQ8VDW0 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx39aQ8VDW0 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx39aQ8VDW0 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx39aQ8VDW0 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Ddx39aQ8VDW0 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx39aQ8VDW0 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx39aQ8VDW0 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx39aQ8VDW0 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx39aQ8VDW0 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx39aQ8VDW0 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx39aQ8VDW0 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx39aQ8VDW0 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx39aQ8VDW0 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.47■□□□□ 0.39
Ddx39aQ8VDW0 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC17.47■□□□□ 0.39
Ddx39aQ8VDW0 Gm37153-201ENSMUST00000193637 231 ntBASIC17.47■□□□□ 0.39
Ddx39aQ8VDW0 AC131586.3-201ENSMUST00000228355 1367 ntBASIC17.47■□□□□ 0.39
Ddx39aQ8VDW0 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx39aQ8VDW0 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.47■□□□□ 0.39
Ddx39aQ8VDW0 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx39aQ8VDW0 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx39aQ8VDW0 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx39aQ8VDW0 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx39aQ8VDW0 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Ddx39aQ8VDW0 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Ddx39aQ8VDW0 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx39aQ8VDW0 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx39aQ8VDW0 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Ddx39aQ8VDW0 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx39aQ8VDW0 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Ddx39aQ8VDW0 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
Ddx39aQ8VDW0 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Ddx39aQ8VDW0 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx39aQ8VDW0 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx39aQ8VDW0 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC17.46■□□□□ 0.39
Ddx39aQ8VDW0 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ddx39aQ8VDW0 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms