Protein–RNA interactions for Protein: Q8VC66

Ssx2ip, Afadin- and alpha-actinin-binding protein, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx2ipQ8VC66 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ssx2ipQ8VC66 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ssx2ipQ8VC66 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ssx2ipQ8VC66 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ssx2ipQ8VC66 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ssx2ipQ8VC66 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ssx2ipQ8VC66 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ssx2ipQ8VC66 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ssx2ipQ8VC66 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ssx2ipQ8VC66 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ssx2ipQ8VC66 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ssx2ipQ8VC66 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.21■□□□□ 0.19
Ssx2ipQ8VC66 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ssx2ipQ8VC66 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Ssx2ipQ8VC66 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ssx2ipQ8VC66 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.21■□□□□ 0.19
Ssx2ipQ8VC66 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.21■□□□□ 0.19
Ssx2ipQ8VC66 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ssx2ipQ8VC66 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
Ssx2ipQ8VC66 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.21■□□□□ 0.19
Ssx2ipQ8VC66 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ssx2ipQ8VC66 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Ssx2ipQ8VC66 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ssx2ipQ8VC66 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.21■□□□□ 0.19
Ssx2ipQ8VC66 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ssx2ipQ8VC66 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.21■□□□□ 0.18
Ssx2ipQ8VC66 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ssx2ipQ8VC66 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
Ssx2ipQ8VC66 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssx2ipQ8VC66 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ssx2ipQ8VC66 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssx2ipQ8VC66 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.2■□□□□ 0.18
Ssx2ipQ8VC66 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssx2ipQ8VC66 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssx2ipQ8VC66 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssx2ipQ8VC66 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ssx2ipQ8VC66 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssx2ipQ8VC66 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssx2ipQ8VC66 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssx2ipQ8VC66 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssx2ipQ8VC66 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ssx2ipQ8VC66 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ssx2ipQ8VC66 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssx2ipQ8VC66 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ssx2ipQ8VC66 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
Ssx2ipQ8VC66 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Ssx2ipQ8VC66 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssx2ipQ8VC66 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssx2ipQ8VC66 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssx2ipQ8VC66 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssx2ipQ8VC66 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssx2ipQ8VC66 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssx2ipQ8VC66 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssx2ipQ8VC66 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssx2ipQ8VC66 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Ssx2ipQ8VC66 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssx2ipQ8VC66 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssx2ipQ8VC66 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssx2ipQ8VC66 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssx2ipQ8VC66 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssx2ipQ8VC66 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ssx2ipQ8VC66 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ssx2ipQ8VC66 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ssx2ipQ8VC66 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ssx2ipQ8VC66 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ssx2ipQ8VC66 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ssx2ipQ8VC66 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ssx2ipQ8VC66 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ssx2ipQ8VC66 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ssx2ipQ8VC66 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ssx2ipQ8VC66 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ssx2ipQ8VC66 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.19■□□□□ 0.18
Ssx2ipQ8VC66 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ssx2ipQ8VC66 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Ssx2ipQ8VC66 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.19■□□□□ 0.18
Ssx2ipQ8VC66 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ssx2ipQ8VC66 Gm17971-201ENSMUST00000190239 806 ntBASIC16.19■□□□□ 0.18
Ssx2ipQ8VC66 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ssx2ipQ8VC66 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Ssx2ipQ8VC66 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ssx2ipQ8VC66 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ssx2ipQ8VC66 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ssx2ipQ8VC66 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ssx2ipQ8VC66 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ssx2ipQ8VC66 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ssx2ipQ8VC66 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ssx2ipQ8VC66 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.19■□□□□ 0.18
Ssx2ipQ8VC66 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ssx2ipQ8VC66 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ssx2ipQ8VC66 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Ssx2ipQ8VC66 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ssx2ipQ8VC66 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ssx2ipQ8VC66 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ssx2ipQ8VC66 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ssx2ipQ8VC66 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ssx2ipQ8VC66 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ssx2ipQ8VC66 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ssx2ipQ8VC66 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ssx2ipQ8VC66 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ssx2ipQ8VC66 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms