Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.48■□□□□ 0.07
Chrna3Q8R4G9 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.48■□□□□ 0.07
Chrna3Q8R4G9 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC15.48■□□□□ 0.07
Chrna3Q8R4G9 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.48■□□□□ 0.07
Chrna3Q8R4G9 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chrna3Q8R4G9 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chrna3Q8R4G9 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chrna3Q8R4G9 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chrna3Q8R4G9 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chrna3Q8R4G9 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chrna3Q8R4G9 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Chrna3Q8R4G9 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Chrna3Q8R4G9 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Chrna3Q8R4G9 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chrna3Q8R4G9 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chrna3Q8R4G9 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chrna3Q8R4G9 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chrna3Q8R4G9 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.48■□□□□ 0.07
Chrna3Q8R4G9 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Chrna3Q8R4G9 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.47■□□□□ 0.07
Chrna3Q8R4G9 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chrna3Q8R4G9 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chrna3Q8R4G9 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chrna3Q8R4G9 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Chrna3Q8R4G9 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chrna3Q8R4G9 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chrna3Q8R4G9 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Chrna3Q8R4G9 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Chrna3Q8R4G9 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chrna3Q8R4G9 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Chrna3Q8R4G9 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chrna3Q8R4G9 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
Chrna3Q8R4G9 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.47■□□□□ 0.07
Chrna3Q8R4G9 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Chrna3Q8R4G9 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.47■□□□□ 0.07
Chrna3Q8R4G9 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.47■□□□□ 0.07
Chrna3Q8R4G9 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.47■□□□□ 0.07
Chrna3Q8R4G9 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.47■□□□□ 0.07
Chrna3Q8R4G9 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Chrna3Q8R4G9 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.47■□□□□ 0.07
Chrna3Q8R4G9 Gm18622-201ENSMUST00000219361 595 ntBASIC15.47■□□□□ 0.07
Chrna3Q8R4G9 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Chrna3Q8R4G9 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Chrna3Q8R4G9 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Chrna3Q8R4G9 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Chrna3Q8R4G9 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Chrna3Q8R4G9 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chrna3Q8R4G9 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chrna3Q8R4G9 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chrna3Q8R4G9 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chrna3Q8R4G9 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chrna3Q8R4G9 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chrna3Q8R4G9 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chrna3Q8R4G9 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chrna3Q8R4G9 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chrna3Q8R4G9 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Chrna3Q8R4G9 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Chrna3Q8R4G9 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chrna3Q8R4G9 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.46■□□□□ 0.07
Chrna3Q8R4G9 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chrna3Q8R4G9 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chrna3Q8R4G9 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chrna3Q8R4G9 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Chrna3Q8R4G9 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.46■□□□□ 0.07
Chrna3Q8R4G9 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chrna3Q8R4G9 Gm25990-201ENSMUST00000102440 86 ntBASIC15.46■□□□□ 0.07
Chrna3Q8R4G9 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Chrna3Q8R4G9 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Chrna3Q8R4G9 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
Chrna3Q8R4G9 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.46■□□□□ 0.07
Chrna3Q8R4G9 Gm6257-201ENSMUST00000163864 910 ntBASIC15.46■□□□□ 0.07
Chrna3Q8R4G9 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Chrna3Q8R4G9 Gm18733-201ENSMUST00000173950 856 ntBASIC15.46■□□□□ 0.07
Chrna3Q8R4G9 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Chrna3Q8R4G9 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.46■□□□□ 0.07
Chrna3Q8R4G9 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.46■□□□□ 0.07
Chrna3Q8R4G9 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Chrna3Q8R4G9 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.46■□□□□ 0.07
Chrna3Q8R4G9 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chrna3Q8R4G9 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chrna3Q8R4G9 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Chrna3Q8R4G9 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Chrna3Q8R4G9 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Chrna3Q8R4G9 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Chrna3Q8R4G9 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
Chrna3Q8R4G9 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chrna3Q8R4G9 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chrna3Q8R4G9 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.45■□□□□ 0.06
Chrna3Q8R4G9 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Chrna3Q8R4G9 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chrna3Q8R4G9 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Chrna3Q8R4G9 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Chrna3Q8R4G9 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Chrna3Q8R4G9 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chrna3Q8R4G9 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chrna3Q8R4G9 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chrna3Q8R4G9 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chrna3Q8R4G9 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Chrna3Q8R4G9 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.45■□□□□ 0.06
Chrna3Q8R4G9 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms