Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Rpp40Q8R1F9 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rpp40Q8R1F9 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
Rpp40Q8R1F9 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rpp40Q8R1F9 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rpp40Q8R1F9 Gm42473-201ENSMUST00000201056 2291 ntBASIC16.89■□□□□ 0.29
Rpp40Q8R1F9 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.89■□□□□ 0.29
Rpp40Q8R1F9 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rpp40Q8R1F9 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rpp40Q8R1F9 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rpp40Q8R1F9 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Rpp40Q8R1F9 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rpp40Q8R1F9 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rpp40Q8R1F9 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rpp40Q8R1F9 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rpp40Q8R1F9 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rpp40Q8R1F9 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.88■□□□□ 0.29
Rpp40Q8R1F9 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rpp40Q8R1F9 Grk6-207ENSMUST00000225925 2769 ntBASIC16.88■□□□□ 0.29
Rpp40Q8R1F9 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Rpp40Q8R1F9 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Rpp40Q8R1F9 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rpp40Q8R1F9 Gm18733-201ENSMUST00000173950 856 ntBASIC16.88■□□□□ 0.29
Rpp40Q8R1F9 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rpp40Q8R1F9 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.88■□□□□ 0.29
Rpp40Q8R1F9 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.88■□□□□ 0.29
Rpp40Q8R1F9 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rpp40Q8R1F9 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rpp40Q8R1F9 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rpp40Q8R1F9 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rpp40Q8R1F9 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rpp40Q8R1F9 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rpp40Q8R1F9 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rpp40Q8R1F9 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpp40Q8R1F9 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpp40Q8R1F9 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpp40Q8R1F9 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rpp40Q8R1F9 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rpp40Q8R1F9 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpp40Q8R1F9 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpp40Q8R1F9 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rpp40Q8R1F9 Gm6550-201ENSMUST00000187574 993 ntBASIC16.87■□□□□ 0.29
Rpp40Q8R1F9 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Rpp40Q8R1F9 Gm19164-201ENSMUST00000210667 640 ntBASIC16.87■□□□□ 0.29
Rpp40Q8R1F9 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpp40Q8R1F9 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rpp40Q8R1F9 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpp40Q8R1F9 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Rpp40Q8R1F9 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpp40Q8R1F9 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpp40Q8R1F9 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpp40Q8R1F9 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Rpp40Q8R1F9 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpp40Q8R1F9 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Rpp40Q8R1F9 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpp40Q8R1F9 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rpp40Q8R1F9 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.86■□□□□ 0.29
Rpp40Q8R1F9 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Rpp40Q8R1F9 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpp40Q8R1F9 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rpp40Q8R1F9 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rpp40Q8R1F9 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rpp40Q8R1F9 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpp40Q8R1F9 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.86■□□□□ 0.29
Rpp40Q8R1F9 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.86■□□□□ 0.29
Rpp40Q8R1F9 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rpp40Q8R1F9 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16.86■□□□□ 0.29
Rpp40Q8R1F9 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.86■□□□□ 0.29
Rpp40Q8R1F9 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpp40Q8R1F9 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Rpp40Q8R1F9 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Rpp40Q8R1F9 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpp40Q8R1F9 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpp40Q8R1F9 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpp40Q8R1F9 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Rpp40Q8R1F9 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpp40Q8R1F9 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Rpp40Q8R1F9 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpp40Q8R1F9 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.85■□□□□ 0.29
Rpp40Q8R1F9 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpp40Q8R1F9 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpp40Q8R1F9 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpp40Q8R1F9 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpp40Q8R1F9 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rpp40Q8R1F9 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpp40Q8R1F9 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Rpp40Q8R1F9 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpp40Q8R1F9 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpp40Q8R1F9 Gm15358-201ENSMUST00000119249 520 ntBASIC16.85■□□□□ 0.29
Rpp40Q8R1F9 Gm12350-201ENSMUST00000121208 462 ntBASIC16.85■□□□□ 0.29
Rpp40Q8R1F9 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.85■□□□□ 0.29
Rpp40Q8R1F9 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.85■□□□□ 0.29
Rpp40Q8R1F9 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpp40Q8R1F9 Mir5126-201ENSMUST00000175513 77 ntBASIC16.85■□□□□ 0.29
Rpp40Q8R1F9 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpp40Q8R1F9 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpp40Q8R1F9 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpp40Q8R1F9 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpp40Q8R1F9 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rpp40Q8R1F9 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms