Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rtn1Q8K0T0 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Rtn1Q8K0T0 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Rtn1Q8K0T0 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rtn1Q8K0T0 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rtn1Q8K0T0 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rtn1Q8K0T0 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rtn1Q8K0T0 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rtn1Q8K0T0 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rtn1Q8K0T0 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rtn1Q8K0T0 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn1Q8K0T0 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn1Q8K0T0 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn1Q8K0T0 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn1Q8K0T0 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn1Q8K0T0 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn1Q8K0T0 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn1Q8K0T0 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn1Q8K0T0 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn1Q8K0T0 Prob1-201ENSMUST00000097619 3021 ntBASIC18.2■□□□□ 0.5
Rtn1Q8K0T0 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Rtn1Q8K0T0 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn1Q8K0T0 App-207ENSMUST00000227737 2827 ntBASIC18.2■□□□□ 0.5
Rtn1Q8K0T0 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn1Q8K0T0 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn1Q8K0T0 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn1Q8K0T0 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC18.2■□□□□ 0.5
Rtn1Q8K0T0 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn1Q8K0T0 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn1Q8K0T0 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.19■□□□□ 0.5
Rtn1Q8K0T0 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn1Q8K0T0 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn1Q8K0T0 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn1Q8K0T0 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn1Q8K0T0 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn1Q8K0T0 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Rtn1Q8K0T0 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn1Q8K0T0 Gm24589-201ENSMUST00000116692 94 ntBASIC18.19■□□□□ 0.5
Rtn1Q8K0T0 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn1Q8K0T0 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC18.19■□□□□ 0.5
Rtn1Q8K0T0 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC18.19■□□□□ 0.5
Rtn1Q8K0T0 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC18.19■□□□□ 0.5
Rtn1Q8K0T0 Umpk-ps-201ENSMUST00000211897 827 ntBASIC18.19■□□□□ 0.5
Rtn1Q8K0T0 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC18.19■□□□□ 0.5
Rtn1Q8K0T0 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn1Q8K0T0 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC18.19■□□□□ 0.5
Rtn1Q8K0T0 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Rtn1Q8K0T0 Birc2-201ENSMUST00000054878 378 ntBASIC18.19■□□□□ 0.5
Rtn1Q8K0T0 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn1Q8K0T0 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn1Q8K0T0 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn1Q8K0T0 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn1Q8K0T0 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn1Q8K0T0 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Rtn1Q8K0T0 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC18.19■□□□□ 0.5
Rtn1Q8K0T0 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn1Q8K0T0 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn1Q8K0T0 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn1Q8K0T0 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn1Q8K0T0 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtn1Q8K0T0 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtn1Q8K0T0 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Rtn1Q8K0T0 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtn1Q8K0T0 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtn1Q8K0T0 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtn1Q8K0T0 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtn1Q8K0T0 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rtn1Q8K0T0 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Rtn1Q8K0T0 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC18.18■□□□□ 0.5
Rtn1Q8K0T0 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Rtn1Q8K0T0 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtn1Q8K0T0 Gm18622-201ENSMUST00000219361 595 ntBASIC18.18■□□□□ 0.5
Rtn1Q8K0T0 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtn1Q8K0T0 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtn1Q8K0T0 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtn1Q8K0T0 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtn1Q8K0T0 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtn1Q8K0T0 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtn1Q8K0T0 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtn1Q8K0T0 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn1Q8K0T0 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn1Q8K0T0 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn1Q8K0T0 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn1Q8K0T0 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn1Q8K0T0 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn1Q8K0T0 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn1Q8K0T0 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn1Q8K0T0 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn1Q8K0T0 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn1Q8K0T0 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn1Q8K0T0 Gm8097-201ENSMUST00000117903 829 ntBASIC18.17■□□□□ 0.5
Rtn1Q8K0T0 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.17■□□□□ 0.5
Rtn1Q8K0T0 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.17■□□□□ 0.5
Rtn1Q8K0T0 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn1Q8K0T0 Gm27459-201ENSMUST00000184860 107 ntBASIC18.17■□□□□ 0.5
Rtn1Q8K0T0 Gm43347-201ENSMUST00000200226 580 ntBASIC18.17■□□□□ 0.5
Rtn1Q8K0T0 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.17■□□□□ 0.5
Rtn1Q8K0T0 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC18.17■□□□□ 0.5
Rtn1Q8K0T0 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn1Q8K0T0 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms