Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgcs1Q8JZK9 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgcs1Q8JZK9 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgcs1Q8JZK9 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgcs1Q8JZK9 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgcs1Q8JZK9 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Hmgcs1Q8JZK9 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgcs1Q8JZK9 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgcs1Q8JZK9 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgcs1Q8JZK9 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgcs1Q8JZK9 Sybu-209ENSMUST00000228639 4113 ntBASIC15.1■□□□□ 0.01
Hmgcs1Q8JZK9 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgcs1Q8JZK9 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgcs1Q8JZK9 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgcs1Q8JZK9 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgcs1Q8JZK9 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgcs1Q8JZK9 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgcs1Q8JZK9 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgcs1Q8JZK9 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgcs1Q8JZK9 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgcs1Q8JZK9 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Hmgcs1Q8JZK9 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgcs1Q8JZK9 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgcs1Q8JZK9 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgcs1Q8JZK9 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Hmgcs1Q8JZK9 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgcs1Q8JZK9 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgcs1Q8JZK9 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgcs1Q8JZK9 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgcs1Q8JZK9 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgcs1Q8JZK9 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgcs1Q8JZK9 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgcs1Q8JZK9 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.09■□□□□ 0.01
Hmgcs1Q8JZK9 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgcs1Q8JZK9 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgcs1Q8JZK9 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Hmgcs1Q8JZK9 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgcs1Q8JZK9 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgcs1Q8JZK9 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Hmgcs1Q8JZK9 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgcs1Q8JZK9 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Hmgcs1Q8JZK9 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hmgcs1Q8JZK9 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Hmgcs1Q8JZK9 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Hmgcs1Q8JZK9 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Hmgcs1Q8JZK9 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Hmgcs1Q8JZK9 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hmgcs1Q8JZK9 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hmgcs1Q8JZK9 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hmgcs1Q8JZK9 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Hmgcs1Q8JZK9 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hmgcs1Q8JZK9 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hmgcs1Q8JZK9 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Hmgcs1Q8JZK9 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hmgcs1Q8JZK9 Gm5587-201ENSMUST00000206270 674 ntBASIC15.08■□□□□ 0
Hmgcs1Q8JZK9 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.08■□□□□ 0
Hmgcs1Q8JZK9 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.08■□□□□ 0
Hmgcs1Q8JZK9 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Hmgcs1Q8JZK9 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Hmgcs1Q8JZK9 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hmgcs1Q8JZK9 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hmgcs1Q8JZK9 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hmgcs1Q8JZK9 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hmgcs1Q8JZK9 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Hmgcs1Q8JZK9 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Hmgcs1Q8JZK9 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Hmgcs1Q8JZK9 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.08■□□□□ 0
Hmgcs1Q8JZK9 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hmgcs1Q8JZK9 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Hmgcs1Q8JZK9 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Hmgcs1Q8JZK9 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgcs1Q8JZK9 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgcs1Q8JZK9 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
Hmgcs1Q8JZK9 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgcs1Q8JZK9 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.07■□□□□ 0
Hmgcs1Q8JZK9 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgcs1Q8JZK9 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgcs1Q8JZK9 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgcs1Q8JZK9 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgcs1Q8JZK9 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgcs1Q8JZK9 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgcs1Q8JZK9 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Hmgcs1Q8JZK9 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgcs1Q8JZK9 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgcs1Q8JZK9 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgcs1Q8JZK9 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.07■□□□□ 0
Hmgcs1Q8JZK9 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.07■□□□□ 0
Hmgcs1Q8JZK9 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgcs1Q8JZK9 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgcs1Q8JZK9 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Hmgcs1Q8JZK9 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgcs1Q8JZK9 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgcs1Q8JZK9 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.07■□□□□ 0
Hmgcs1Q8JZK9 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.07■□□□□ 0
Hmgcs1Q8JZK9 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgcs1Q8JZK9 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hmgcs1Q8JZK9 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Hmgcs1Q8JZK9 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Hmgcs1Q8JZK9 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.06■□□□□ 0
Hmgcs1Q8JZK9 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms