Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Smc4Q8CG47 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smc4Q8CG47 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smc4Q8CG47 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Smc4Q8CG47 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smc4Q8CG47 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smc4Q8CG47 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
Smc4Q8CG47 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smc4Q8CG47 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC19.4■□□□□ 0.7
Smc4Q8CG47 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Smc4Q8CG47 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smc4Q8CG47 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Smc4Q8CG47 Gm37153-201ENSMUST00000193637 231 ntBASIC19.4■□□□□ 0.7
Smc4Q8CG47 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC19.4■□□□□ 0.7
Smc4Q8CG47 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smc4Q8CG47 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smc4Q8CG47 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smc4Q8CG47 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Smc4Q8CG47 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smc4Q8CG47 Gm43072-201ENSMUST00000200283 1671 ntBASIC19.4■□□□□ 0.7
Smc4Q8CG47 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smc4Q8CG47 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Smc4Q8CG47 Gm14140-201ENSMUST00000119999 995 ntBASIC19.39■□□□□ 0.69
Smc4Q8CG47 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC19.39■□□□□ 0.69
Smc4Q8CG47 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smc4Q8CG47 AC084391.1-201ENSMUST00000200651 141 ntBASIC19.39■□□□□ 0.69
Smc4Q8CG47 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smc4Q8CG47 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smc4Q8CG47 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC19.39■□□□□ 0.69
Smc4Q8CG47 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smc4Q8CG47 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smc4Q8CG47 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smc4Q8CG47 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Smc4Q8CG47 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
Smc4Q8CG47 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smc4Q8CG47 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC19.39■□□□□ 0.69
Smc4Q8CG47 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
Smc4Q8CG47 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Smc4Q8CG47 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.39■□□□□ 0.69
Smc4Q8CG47 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smc4Q8CG47 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smc4Q8CG47 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smc4Q8CG47 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Smc4Q8CG47 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC19.38■□□□□ 0.69
Smc4Q8CG47 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Smc4Q8CG47 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smc4Q8CG47 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smc4Q8CG47 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smc4Q8CG47 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Smc4Q8CG47 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Smc4Q8CG47 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smc4Q8CG47 Gm5682-201ENSMUST00000173402 505 ntBASIC19.38■□□□□ 0.69
Smc4Q8CG47 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smc4Q8CG47 Gm8000-201ENSMUST00000188378 592 ntBASIC19.38■□□□□ 0.69
Smc4Q8CG47 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Smc4Q8CG47 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Smc4Q8CG47 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smc4Q8CG47 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smc4Q8CG47 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smc4Q8CG47 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smc4Q8CG47 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Smc4Q8CG47 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smc4Q8CG47 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smc4Q8CG47 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smc4Q8CG47 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smc4Q8CG47 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smc4Q8CG47 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
Smc4Q8CG47 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smc4Q8CG47 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smc4Q8CG47 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC19.37■□□□□ 0.69
Smc4Q8CG47 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Smc4Q8CG47 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smc4Q8CG47 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC19.37■□□□□ 0.69
Smc4Q8CG47 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smc4Q8CG47 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC19.37■□□□□ 0.69
Smc4Q8CG47 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC19.37■□□□□ 0.69
Smc4Q8CG47 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smc4Q8CG47 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smc4Q8CG47 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smc4Q8CG47 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Smc4Q8CG47 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smc4Q8CG47 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smc4Q8CG47 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smc4Q8CG47 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smc4Q8CG47 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Smc4Q8CG47 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Smc4Q8CG47 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Smc4Q8CG47 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Smc4Q8CG47 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smc4Q8CG47 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC19.36■□□□□ 0.69
Smc4Q8CG47 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Smc4Q8CG47 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Smc4Q8CG47 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC19.36■□□□□ 0.69
Smc4Q8CG47 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC19.36■□□□□ 0.69
Smc4Q8CG47 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smc4Q8CG47 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smc4Q8CG47 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.36■□□□□ 0.69
Smc4Q8CG47 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smc4Q8CG47 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smc4Q8CG47 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms