Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim52Q8CDV4 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim52Q8CDV4 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trim52Q8CDV4 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.4■□□□□ 0.7
Trim52Q8CDV4 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC19.4■□□□□ 0.7
Trim52Q8CDV4 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Trim52Q8CDV4 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Trim52Q8CDV4 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC19.4■□□□□ 0.7
Trim52Q8CDV4 Gm45612-201ENSMUST00000211320 160 ntBASIC19.4■□□□□ 0.7
Trim52Q8CDV4 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim52Q8CDV4 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim52Q8CDV4 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim52Q8CDV4 AC157650.3-201ENSMUST00000225058 1476 ntBASIC19.4■□□□□ 0.7
Trim52Q8CDV4 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim52Q8CDV4 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC19.4■□□□□ 0.7
Trim52Q8CDV4 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trim52Q8CDV4 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trim52Q8CDV4 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trim52Q8CDV4 Gm29361-201ENSMUST00000183323 2000 ntBASIC19.39■□□□□ 0.69
Trim52Q8CDV4 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim52Q8CDV4 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim52Q8CDV4 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim52Q8CDV4 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trim52Q8CDV4 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim52Q8CDV4 Gm27301-201ENSMUST00000184012 127 ntBASIC19.39■□□□□ 0.69
Trim52Q8CDV4 Thap2-203ENSMUST00000218989 527 ntBASIC19.39■□□□□ 0.69
Trim52Q8CDV4 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim52Q8CDV4 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Trim52Q8CDV4 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trim52Q8CDV4 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim52Q8CDV4 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trim52Q8CDV4 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Trim52Q8CDV4 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Trim52Q8CDV4 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trim52Q8CDV4 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim52Q8CDV4 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim52Q8CDV4 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim52Q8CDV4 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim52Q8CDV4 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC19.38■□□□□ 0.69
Trim52Q8CDV4 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim52Q8CDV4 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim52Q8CDV4 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim52Q8CDV4 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim52Q8CDV4 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
Trim52Q8CDV4 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC19.38■□□□□ 0.69
Trim52Q8CDV4 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim52Q8CDV4 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim52Q8CDV4 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim52Q8CDV4 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim52Q8CDV4 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim52Q8CDV4 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim52Q8CDV4 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Trim52Q8CDV4 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim52Q8CDV4 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Trim52Q8CDV4 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim52Q8CDV4 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim52Q8CDV4 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trim52Q8CDV4 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Trim52Q8CDV4 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trim52Q8CDV4 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC19.37■□□□□ 0.69
Trim52Q8CDV4 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim52Q8CDV4 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim52Q8CDV4 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim52Q8CDV4 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim52Q8CDV4 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim52Q8CDV4 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim52Q8CDV4 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Trim52Q8CDV4 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC19.37■□□□□ 0.69
Trim52Q8CDV4 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC19.37■□□□□ 0.69
Trim52Q8CDV4 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim52Q8CDV4 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Trim52Q8CDV4 Gm27494-201ENSMUST00000184735 189 ntBASIC19.37■□□□□ 0.69
Trim52Q8CDV4 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim52Q8CDV4 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC19.37■□□□□ 0.69
Trim52Q8CDV4 Ntrk2-205ENSMUST00000224402 2284 ntBASIC19.37■□□□□ 0.69
Trim52Q8CDV4 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Trim52Q8CDV4 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Trim52Q8CDV4 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim52Q8CDV4 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim52Q8CDV4 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trim52Q8CDV4 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim52Q8CDV4 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim52Q8CDV4 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Trim52Q8CDV4 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Trim52Q8CDV4 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim52Q8CDV4 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Trim52Q8CDV4 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trim52Q8CDV4 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Trim52Q8CDV4 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trim52Q8CDV4 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Trim52Q8CDV4 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC19.36■□□□□ 0.69
Trim52Q8CDV4 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim52Q8CDV4 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim52Q8CDV4 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Trim52Q8CDV4 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.36■□□□□ 0.69
Trim52Q8CDV4 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Trim52Q8CDV4 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim52Q8CDV4 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Trim52Q8CDV4 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trim52Q8CDV4 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms