Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC18.35■□□□□ 0.53
Vps53Q8CCB4 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC18.35■□□□□ 0.53
Vps53Q8CCB4 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC18.35■□□□□ 0.53
Vps53Q8CCB4 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Vps53Q8CCB4 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.35■□□□□ 0.53
Vps53Q8CCB4 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC18.35■□□□□ 0.53
Vps53Q8CCB4 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps53Q8CCB4 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps53Q8CCB4 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Vps53Q8CCB4 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps53Q8CCB4 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps53Q8CCB4 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps53Q8CCB4 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps53Q8CCB4 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Vps53Q8CCB4 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Vps53Q8CCB4 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Vps53Q8CCB4 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Vps53Q8CCB4 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps53Q8CCB4 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps53Q8CCB4 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps53Q8CCB4 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC18.34■□□□□ 0.53
Vps53Q8CCB4 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC18.34■□□□□ 0.53
Vps53Q8CCB4 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Vps53Q8CCB4 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC18.34■□□□□ 0.53
Vps53Q8CCB4 Gm5712-201ENSMUST00000199748 1043 ntBASIC18.34■□□□□ 0.53
Vps53Q8CCB4 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps53Q8CCB4 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC18.34■□□□□ 0.53
Vps53Q8CCB4 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps53Q8CCB4 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Vps53Q8CCB4 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC18.34■□□□□ 0.53
Vps53Q8CCB4 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps53Q8CCB4 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Vps53Q8CCB4 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps53Q8CCB4 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps53Q8CCB4 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Vps53Q8CCB4 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Vps53Q8CCB4 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
Vps53Q8CCB4 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
Vps53Q8CCB4 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vps53Q8CCB4 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vps53Q8CCB4 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vps53Q8CCB4 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vps53Q8CCB4 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Vps53Q8CCB4 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Vps53Q8CCB4 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC18.33■□□□□ 0.52
Vps53Q8CCB4 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps53Q8CCB4 Gm27525-201ENSMUST00000184465 107 ntBASIC18.33■□□□□ 0.52
Vps53Q8CCB4 Gm37935-201ENSMUST00000192012 982 ntBASIC18.33■□□□□ 0.52
Vps53Q8CCB4 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Vps53Q8CCB4 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps53Q8CCB4 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps53Q8CCB4 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Vps53Q8CCB4 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps53Q8CCB4 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps53Q8CCB4 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Vps53Q8CCB4 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps53Q8CCB4 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.33■□□□□ 0.52
Vps53Q8CCB4 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Vps53Q8CCB4 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Vps53Q8CCB4 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps53Q8CCB4 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps53Q8CCB4 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps53Q8CCB4 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps53Q8CCB4 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Vps53Q8CCB4 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Vps53Q8CCB4 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Vps53Q8CCB4 Gm6376-201ENSMUST00000209407 580 ntBASIC18.32■□□□□ 0.52
Vps53Q8CCB4 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC18.32■□□□□ 0.52
Vps53Q8CCB4 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps53Q8CCB4 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps53Q8CCB4 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Vps53Q8CCB4 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Vps53Q8CCB4 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC18.32■□□□□ 0.52
Vps53Q8CCB4 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.32■□□□□ 0.52
Vps53Q8CCB4 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps53Q8CCB4 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps53Q8CCB4 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.32■□□□□ 0.52
Vps53Q8CCB4 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Vps53Q8CCB4 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps53Q8CCB4 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Vps53Q8CCB4 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Vps53Q8CCB4 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Vps53Q8CCB4 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Vps53Q8CCB4 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps53Q8CCB4 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC18.31■□□□□ 0.52
Vps53Q8CCB4 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Vps53Q8CCB4 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps53Q8CCB4 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC18.31■□□□□ 0.52
Vps53Q8CCB4 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps53Q8CCB4 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.31■□□□□ 0.52
Vps53Q8CCB4 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps53Q8CCB4 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps53Q8CCB4 AC132104.2-201ENSMUST00000215011 266 ntBASIC18.31■□□□□ 0.52
Vps53Q8CCB4 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Vps53Q8CCB4 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps53Q8CCB4 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps53Q8CCB4 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Vps53Q8CCB4 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Vps53Q8CCB4 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Vps53Q8CCB4 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms