Protein–RNA interactions for Protein: Q8C735

Lin9, Protein lin-9 homolog, mousemouse

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin9Q8C735 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lin9Q8C735 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lin9Q8C735 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Lin9Q8C735 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lin9Q8C735 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.24■□□□□ 0.35
Lin9Q8C735 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lin9Q8C735 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lin9Q8C735 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lin9Q8C735 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lin9Q8C735 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.24■□□□□ 0.35
Lin9Q8C735 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lin9Q8C735 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lin9Q8C735 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lin9Q8C735 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lin9Q8C735 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lin9Q8C735 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lin9Q8C735 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lin9Q8C735 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.24■□□□□ 0.35
Lin9Q8C735 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Lin9Q8C735 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lin9Q8C735 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lin9Q8C735 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC17.23■□□□□ 0.35
Lin9Q8C735 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Lin9Q8C735 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lin9Q8C735 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lin9Q8C735 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lin9Q8C735 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lin9Q8C735 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lin9Q8C735 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lin9Q8C735 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.23■□□□□ 0.35
Lin9Q8C735 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.23■□□□□ 0.35
Lin9Q8C735 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lin9Q8C735 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lin9Q8C735 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lin9Q8C735 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lin9Q8C735 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lin9Q8C735 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lin9Q8C735 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lin9Q8C735 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lin9Q8C735 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lin9Q8C735 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lin9Q8C735 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lin9Q8C735 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Lin9Q8C735 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lin9Q8C735 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lin9Q8C735 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.22■□□□□ 0.35
Lin9Q8C735 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lin9Q8C735 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lin9Q8C735 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.22■□□□□ 0.35
Lin9Q8C735 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lin9Q8C735 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.22■□□□□ 0.35
Lin9Q8C735 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lin9Q8C735 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lin9Q8C735 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lin9Q8C735 Rps4l-201ENSMUST00000071745 943 ntBASIC17.22■□□□□ 0.35
Lin9Q8C735 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.22■□□□□ 0.35
Lin9Q8C735 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lin9Q8C735 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lin9Q8C735 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lin9Q8C735 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Lin9Q8C735 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lin9Q8C735 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lin9Q8C735 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Lin9Q8C735 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lin9Q8C735 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Lin9Q8C735 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lin9Q8C735 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lin9Q8C735 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lin9Q8C735 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lin9Q8C735 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lin9Q8C735 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Lin9Q8C735 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Lin9Q8C735 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Lin9Q8C735 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Lin9Q8C735 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Lin9Q8C735 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Lin9Q8C735 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Lin9Q8C735 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lin9Q8C735 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Lin9Q8C735 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.21■□□□□ 0.35
Lin9Q8C735 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lin9Q8C735 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Lin9Q8C735 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lin9Q8C735 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.21■□□□□ 0.35
Lin9Q8C735 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Lin9Q8C735 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lin9Q8C735 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lin9Q8C735 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lin9Q8C735 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.21■□□□□ 0.35
Lin9Q8C735 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lin9Q8C735 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lin9Q8C735 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lin9Q8C735 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lin9Q8C735 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Lin9Q8C735 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lin9Q8C735 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
Lin9Q8C735 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.2■□□□□ 0.34
Lin9Q8C735 Gm15165-201ENSMUST00000118140 502 ntBASIC17.2■□□□□ 0.34
Lin9Q8C735 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Lin9Q8C735 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms