Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Tsen54Q8C2A2 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Tsen54Q8C2A2 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tsen54Q8C2A2 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Tsen54Q8C2A2 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.25□□□□□ -0.29
Tsen54Q8C2A2 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tsen54Q8C2A2 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Tsen54Q8C2A2 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Tsen54Q8C2A2 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tsen54Q8C2A2 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Tsen54Q8C2A2 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Tsen54Q8C2A2 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Tsen54Q8C2A2 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tsen54Q8C2A2 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tsen54Q8C2A2 Phf7-203ENSMUST00000226565 1971 ntBASIC13.25□□□□□ -0.29
Tsen54Q8C2A2 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tsen54Q8C2A2 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Tsen54Q8C2A2 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Tsen54Q8C2A2 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tsen54Q8C2A2 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tsen54Q8C2A2 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Tsen54Q8C2A2 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tsen54Q8C2A2 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Tsen54Q8C2A2 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tsen54Q8C2A2 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tsen54Q8C2A2 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tsen54Q8C2A2 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Tsen54Q8C2A2 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Tsen54Q8C2A2 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tsen54Q8C2A2 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.24□□□□□ -0.29
Tsen54Q8C2A2 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tsen54Q8C2A2 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC13.24□□□□□ -0.29
Tsen54Q8C2A2 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tsen54Q8C2A2 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tsen54Q8C2A2 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Tsen54Q8C2A2 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC13.24□□□□□ -0.29
Tsen54Q8C2A2 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Tsen54Q8C2A2 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tsen54Q8C2A2 Gm37305-201ENSMUST00000195714 4279 ntBASIC13.24□□□□□ -0.29
Tsen54Q8C2A2 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tsen54Q8C2A2 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tsen54Q8C2A2 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tsen54Q8C2A2 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Tsen54Q8C2A2 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Tsen54Q8C2A2 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Tsen54Q8C2A2 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Tsen54Q8C2A2 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.24□□□□□ -0.29
Tsen54Q8C2A2 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Tsen54Q8C2A2 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tsen54Q8C2A2 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Tsen54Q8C2A2 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Tsen54Q8C2A2 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tsen54Q8C2A2 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tsen54Q8C2A2 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tsen54Q8C2A2 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tsen54Q8C2A2 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tsen54Q8C2A2 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tsen54Q8C2A2 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tsen54Q8C2A2 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.23□□□□□ -0.29
Tsen54Q8C2A2 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Tsen54Q8C2A2 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Tsen54Q8C2A2 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Tsen54Q8C2A2 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tsen54Q8C2A2 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tsen54Q8C2A2 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tsen54Q8C2A2 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Tsen54Q8C2A2 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC13.23□□□□□ -0.29
Tsen54Q8C2A2 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tsen54Q8C2A2 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC13.23□□□□□ -0.29
Tsen54Q8C2A2 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tsen54Q8C2A2 Gm30025-201ENSMUST00000218555 728 ntBASIC13.23□□□□□ -0.29
Tsen54Q8C2A2 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tsen54Q8C2A2 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tsen54Q8C2A2 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tsen54Q8C2A2 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Tsen54Q8C2A2 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tsen54Q8C2A2 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tsen54Q8C2A2 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Tsen54Q8C2A2 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tsen54Q8C2A2 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Tsen54Q8C2A2 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Tsen54Q8C2A2 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tsen54Q8C2A2 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Tsen54Q8C2A2 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Tsen54Q8C2A2 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Tsen54Q8C2A2 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Tsen54Q8C2A2 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tsen54Q8C2A2 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Tsen54Q8C2A2 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Tsen54Q8C2A2 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tsen54Q8C2A2 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Tsen54Q8C2A2 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Tsen54Q8C2A2 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tsen54Q8C2A2 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tsen54Q8C2A2 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tsen54Q8C2A2 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tsen54Q8C2A2 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tsen54Q8C2A2 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Tsen54Q8C2A2 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Tsen54Q8C2A2 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms