Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim47Q8C0E3 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim47Q8C0E3 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim47Q8C0E3 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.47■□□□□ 0.39
Trim47Q8C0E3 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim47Q8C0E3 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim47Q8C0E3 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim47Q8C0E3 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim47Q8C0E3 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim47Q8C0E3 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim47Q8C0E3 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC17.46■□□□□ 0.39
Trim47Q8C0E3 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim47Q8C0E3 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim47Q8C0E3 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim47Q8C0E3 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim47Q8C0E3 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim47Q8C0E3 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.46■□□□□ 0.39
Trim47Q8C0E3 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim47Q8C0E3 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim47Q8C0E3 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim47Q8C0E3 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC17.46■□□□□ 0.39
Trim47Q8C0E3 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim47Q8C0E3 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim47Q8C0E3 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim47Q8C0E3 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim47Q8C0E3 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim47Q8C0E3 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim47Q8C0E3 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim47Q8C0E3 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Trim47Q8C0E3 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim47Q8C0E3 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim47Q8C0E3 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Trim47Q8C0E3 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC17.45■□□□□ 0.38
Trim47Q8C0E3 Gm6550-201ENSMUST00000187574 993 ntBASIC17.45■□□□□ 0.38
Trim47Q8C0E3 AW822252-206ENSMUST00000208904 237 ntBASIC17.45■□□□□ 0.38
Trim47Q8C0E3 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim47Q8C0E3 Gm15590-201ENSMUST00000078419 552 ntBASIC17.45■□□□□ 0.38
Trim47Q8C0E3 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim47Q8C0E3 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Trim47Q8C0E3 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim47Q8C0E3 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim47Q8C0E3 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim47Q8C0E3 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim47Q8C0E3 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim47Q8C0E3 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim47Q8C0E3 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim47Q8C0E3 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.44■□□□□ 0.38
Trim47Q8C0E3 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.44■□□□□ 0.38
Trim47Q8C0E3 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim47Q8C0E3 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.44■□□□□ 0.38
Trim47Q8C0E3 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
Trim47Q8C0E3 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.44■□□□□ 0.38
Trim47Q8C0E3 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim47Q8C0E3 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim47Q8C0E3 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.44■□□□□ 0.38
Trim47Q8C0E3 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.44■□□□□ 0.38
Trim47Q8C0E3 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Trim47Q8C0E3 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim47Q8C0E3 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim47Q8C0E3 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim47Q8C0E3 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim47Q8C0E3 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim47Q8C0E3 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim47Q8C0E3 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Trim47Q8C0E3 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim47Q8C0E3 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Trim47Q8C0E3 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim47Q8C0E3 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim47Q8C0E3 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim47Q8C0E3 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Trim47Q8C0E3 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim47Q8C0E3 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim47Q8C0E3 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim47Q8C0E3 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim47Q8C0E3 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim47Q8C0E3 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim47Q8C0E3 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim47Q8C0E3 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim47Q8C0E3 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.43■□□□□ 0.38
Trim47Q8C0E3 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.43■□□□□ 0.38
Trim47Q8C0E3 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Trim47Q8C0E3 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim47Q8C0E3 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim47Q8C0E3 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim47Q8C0E3 Mir5126-201ENSMUST00000175513 77 ntBASIC17.43■□□□□ 0.38
Trim47Q8C0E3 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.43■□□□□ 0.38
Trim47Q8C0E3 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim47Q8C0E3 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
Trim47Q8C0E3 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim47Q8C0E3 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC17.43■□□□□ 0.38
Trim47Q8C0E3 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim47Q8C0E3 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim47Q8C0E3 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.43■□□□□ 0.38
Trim47Q8C0E3 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Trim47Q8C0E3 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim47Q8C0E3 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim47Q8C0E3 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Trim47Q8C0E3 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim47Q8C0E3 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim47Q8C0E3 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms