Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scfd1Q8BRF7 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scfd1Q8BRF7 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scfd1Q8BRF7 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Scfd1Q8BRF7 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17.99■□□□□ 0.47
Scfd1Q8BRF7 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC17.99■□□□□ 0.47
Scfd1Q8BRF7 Mir3113-201ENSMUST00000175478 76 ntBASIC17.99■□□□□ 0.47
Scfd1Q8BRF7 AC174742.1-201ENSMUST00000218272 304 ntBASIC17.99■□□□□ 0.47
Scfd1Q8BRF7 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC17.99■□□□□ 0.47
Scfd1Q8BRF7 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Scfd1Q8BRF7 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scfd1Q8BRF7 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scfd1Q8BRF7 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scfd1Q8BRF7 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scfd1Q8BRF7 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scfd1Q8BRF7 Grk6-207ENSMUST00000225925 2769 ntBASIC17.99■□□□□ 0.47
Scfd1Q8BRF7 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scfd1Q8BRF7 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scfd1Q8BRF7 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Scfd1Q8BRF7 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Scfd1Q8BRF7 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scfd1Q8BRF7 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
Scfd1Q8BRF7 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scfd1Q8BRF7 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scfd1Q8BRF7 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scfd1Q8BRF7 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.98■□□□□ 0.47
Scfd1Q8BRF7 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC17.98■□□□□ 0.47
Scfd1Q8BRF7 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Scfd1Q8BRF7 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scfd1Q8BRF7 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scfd1Q8BRF7 Gm27702-201ENSMUST00000184512 56 ntBASIC17.98■□□□□ 0.47
Scfd1Q8BRF7 Gm2756-201ENSMUST00000195851 400 ntBASIC17.98■□□□□ 0.47
Scfd1Q8BRF7 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scfd1Q8BRF7 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scfd1Q8BRF7 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scfd1Q8BRF7 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scfd1Q8BRF7 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scfd1Q8BRF7 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scfd1Q8BRF7 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scfd1Q8BRF7 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
Scfd1Q8BRF7 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scfd1Q8BRF7 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Scfd1Q8BRF7 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Scfd1Q8BRF7 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scfd1Q8BRF7 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scfd1Q8BRF7 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scfd1Q8BRF7 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scfd1Q8BRF7 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scfd1Q8BRF7 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Scfd1Q8BRF7 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Scfd1Q8BRF7 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scfd1Q8BRF7 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scfd1Q8BRF7 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scfd1Q8BRF7 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Scfd1Q8BRF7 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.98■□□□□ 0.47
Scfd1Q8BRF7 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scfd1Q8BRF7 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scfd1Q8BRF7 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.97■□□□□ 0.47
Scfd1Q8BRF7 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scfd1Q8BRF7 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scfd1Q8BRF7 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC17.97■□□□□ 0.47
Scfd1Q8BRF7 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Scfd1Q8BRF7 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Scfd1Q8BRF7 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC17.97■□□□□ 0.47
Scfd1Q8BRF7 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17.97■□□□□ 0.47
Scfd1Q8BRF7 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Scfd1Q8BRF7 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Scfd1Q8BRF7 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scfd1Q8BRF7 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Scfd1Q8BRF7 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Scfd1Q8BRF7 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Scfd1Q8BRF7 AC225888.1-201ENSMUST00000227184 728 ntBASIC17.97■□□□□ 0.47
Scfd1Q8BRF7 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scfd1Q8BRF7 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scfd1Q8BRF7 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scfd1Q8BRF7 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scfd1Q8BRF7 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scfd1Q8BRF7 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Scfd1Q8BRF7 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scfd1Q8BRF7 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Scfd1Q8BRF7 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Scfd1Q8BRF7 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scfd1Q8BRF7 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scfd1Q8BRF7 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scfd1Q8BRF7 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Scfd1Q8BRF7 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Scfd1Q8BRF7 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scfd1Q8BRF7 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Scfd1Q8BRF7 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scfd1Q8BRF7 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.96■□□□□ 0.47
Scfd1Q8BRF7 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scfd1Q8BRF7 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scfd1Q8BRF7 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Scfd1Q8BRF7 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scfd1Q8BRF7 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Scfd1Q8BRF7 Gm6736-201ENSMUST00000166583 948 ntBASIC17.96■□□□□ 0.47
Scfd1Q8BRF7 Gm7286-201ENSMUST00000182691 1007 ntBASIC17.96■□□□□ 0.47
Scfd1Q8BRF7 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC17.96■□□□□ 0.47
Scfd1Q8BRF7 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC17.96■□□□□ 0.47
Scfd1Q8BRF7 Gm44945-201ENSMUST00000206764 1187 ntBASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms