Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.71■□□□□ 0.27
Rd3Q8BRE0 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC16.71■□□□□ 0.27
Rd3Q8BRE0 Gm25911-201ENSMUST00000157621 56 ntBASIC16.71■□□□□ 0.27
Rd3Q8BRE0 Gm37153-201ENSMUST00000193637 231 ntBASIC16.71■□□□□ 0.27
Rd3Q8BRE0 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rd3Q8BRE0 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Rd3Q8BRE0 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Rd3Q8BRE0 Ndufaf2-202ENSMUST00000223734 556 ntBASIC16.71■□□□□ 0.27
Rd3Q8BRE0 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rd3Q8BRE0 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rd3Q8BRE0 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rd3Q8BRE0 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rd3Q8BRE0 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rd3Q8BRE0 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rd3Q8BRE0 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Rd3Q8BRE0 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.7■□□□□ 0.26
Rd3Q8BRE0 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rd3Q8BRE0 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rd3Q8BRE0 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rd3Q8BRE0 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Rd3Q8BRE0 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Rd3Q8BRE0 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rd3Q8BRE0 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rd3Q8BRE0 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Rd3Q8BRE0 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.7■□□□□ 0.26
Rd3Q8BRE0 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rd3Q8BRE0 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Rd3Q8BRE0 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rd3Q8BRE0 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rd3Q8BRE0 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC16.7■□□□□ 0.26
Rd3Q8BRE0 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC16.7■□□□□ 0.26
Rd3Q8BRE0 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.7■□□□□ 0.26
Rd3Q8BRE0 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.7■□□□□ 0.26
Rd3Q8BRE0 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.7■□□□□ 0.26
Rd3Q8BRE0 Gm4899-201ENSMUST00000178708 719 ntBASIC16.7■□□□□ 0.26
Rd3Q8BRE0 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.7■□□□□ 0.26
Rd3Q8BRE0 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Rd3Q8BRE0 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rd3Q8BRE0 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rd3Q8BRE0 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rd3Q8BRE0 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rd3Q8BRE0 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rd3Q8BRE0 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rd3Q8BRE0 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Rd3Q8BRE0 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Rd3Q8BRE0 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.7■□□□□ 0.26
Rd3Q8BRE0 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.7■□□□□ 0.26
Rd3Q8BRE0 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.69■□□□□ 0.26
Rd3Q8BRE0 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rd3Q8BRE0 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Rd3Q8BRE0 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rd3Q8BRE0 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.69■□□□□ 0.26
Rd3Q8BRE0 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rd3Q8BRE0 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rd3Q8BRE0 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Rd3Q8BRE0 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rd3Q8BRE0 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rd3Q8BRE0 Mir8117-201ENSMUST00000184773 107 ntBASIC16.69■□□□□ 0.26
Rd3Q8BRE0 Gm7229-201ENSMUST00000214719 1007 ntBASIC16.69■□□□□ 0.26
Rd3Q8BRE0 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rd3Q8BRE0 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rd3Q8BRE0 Gm10175-201ENSMUST00000086013 645 ntBASIC16.69■□□□□ 0.26
Rd3Q8BRE0 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rd3Q8BRE0 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rd3Q8BRE0 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.69■□□□□ 0.26
Rd3Q8BRE0 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.69■□□□□ 0.26
Rd3Q8BRE0 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rd3Q8BRE0 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rd3Q8BRE0 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rd3Q8BRE0 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.68■□□□□ 0.26
Rd3Q8BRE0 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Rd3Q8BRE0 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rd3Q8BRE0 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rd3Q8BRE0 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rd3Q8BRE0 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rd3Q8BRE0 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rd3Q8BRE0 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.68■□□□□ 0.26
Rd3Q8BRE0 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rd3Q8BRE0 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC16.68■□□□□ 0.26
Rd3Q8BRE0 AC151286.1-201ENSMUST00000198489 145 ntBASIC16.68■□□□□ 0.26
Rd3Q8BRE0 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rd3Q8BRE0 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rd3Q8BRE0 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.68■□□□□ 0.26
Rd3Q8BRE0 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rd3Q8BRE0 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rd3Q8BRE0 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Rd3Q8BRE0 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rd3Q8BRE0 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rd3Q8BRE0 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rd3Q8BRE0 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rd3Q8BRE0 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rd3Q8BRE0 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Rd3Q8BRE0 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rd3Q8BRE0 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rd3Q8BRE0 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rd3Q8BRE0 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rd3Q8BRE0 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rd3Q8BRE0 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rd3Q8BRE0 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rd3Q8BRE0 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms